Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0377 ATGAAAGTTCATCATTTGAACTTCTTCTTTTTCATATTATTGACTGTATCCTTCCTGGTGATCCCCACTGCAAAAGGGACCGACACCATTCAATTCCGCACTGTCAATGAATCCCGAACAAGAAGATTTCTGCACCAACCATTGTTTCCGGAGACTTTTGCTCCACCACCAGGCACCGAGTCACCGCCGCCTCCGCCGCCGGTCACCCCACCTCCTCCCGATACCGACATTCCTTTCTTTCACGAGTATCCCGTAGGGCCTCCCCCGGATCAGGATCAGCCACCACCCTCGACTTCCAATGACACAGTTGTGAACCCAACAGCAATACAGGCACAGACTGCTAAGCCAAGAAAGAAGGTCGCAATTGCGATCTCTGTTGGAATTGTGACGCTTGGTATGCTCTCGGCTCTTGCCTTCTTCTTGTACAGGCACCGGGTGAAACACCCCGGCAACACCCAGAAGCTCGTACTTGGGAATTCCCAGAGGATTCCTGACGATTCAAGGGCGCCACCATCTAGTTTTCTCTACATTGGGACTGTGGAGCCAATCCAAACATTAGCGAGTGAGCCAAGTGAAACCAATGAAGCAACCAAGTCACCTTATCGCAAGCTCAATTCTATTAAGCGATCTGATCGATACCGTCCAAGTCCTGAATTGCAGCCATTGCCGCCACTAAGTAAGCCTCCAGATGGGAATAACCCACCGGCAATATCTTCGTCGTCGTCCGACGAGGAAAGCCACGAGACAGCCTTCCATTCGCCACAAGGATCATCGCTCAGTTACGAGGATAGCTATTACACGCCAGTTTCGCGTCAGGGTTATCTGGCTAACGGTAGTCCGGCGGCACCTGCCAGGACTGAGACTCATTCCACGACTTCTCTTCCCTATTCAAAGAGAACCTCACCAAAAAATCGGCTCTCGGCTACGTCGCCGGATACAAGGCATGCCATTATACCATCGATAAAGCAGGCTCCACCGCCGCCTCCGCCGCCGCCGCCGCCAACAACCCCATTTCAGCATTTGGATAAACAAGTGACCTCCGGTCCTTCCCGAAGGCCAAAATTCTCAGCGCCTCCCCCGGCCCCAAATTTGACGCATCTTCAGTCAACAAACAATACACCCCCCAAGCTATCGAGGACTTCACTTAATCCTCCGCCTCCTCCTCCTCCTCCTCCTCCGCCTCCTCCGCCGCCGCAAACAACACCACGTAAAGAAGGATCTCCGGCAATAAGTGTTTCCTCATCCTCTGCATCTAGAAAGCATCAGTCTTGGGCTCGGAGTGAAGGAGCCGCTTCTGCTAATAGTATAACAAAAGCCTCATGGCATGTTGATAAAAGGCTCGGCTCTTCCGAAAAGCTGGAAGCCGATGACACGGATGAAGCGAAACCCAAGTTAAAGGCTCTGCATTGGGATAAAGTCCGAGCGACCTCAGACCGCGCTACAGTGTGGGACCAGCTAAAATCAAGCTCATTTCAATTAAATGAGGACATGATGGAAACCCTGTTTGGCTGTAATTCCACAAATGCCGCCCCAAAAGAATCTACTAGAAAATCAGTTCTTCCCCCTATTGATCAGGAGGACAGGGTGTTAGACCCCAAGAAGTCCCAAAACATAGCCATACTACTGAGGGCACTGAATGTGACAAGAGATGAGGTGTCCGAAGCTCTTTTAGACGGGAATTCTGAAGGTTTGGGTTCTGAGCTATTGGAAACTCTAGTAAAGATGGCTCCAACTAAGGAGGAAGAGATAAAACTTAGAAACTACAATGGTGACCTCTCAAAACTTGGGTCCGCAGAAAGATTTCTTAAAGCGGTGCTTGATATCCCTTTTGCTTTCAAAAGAGTCGAAGCCATGCTATACAGAGCTAACTTTGATACGGAAGTTAATTACCTGAGGAAGTCTTTTGAAACCCTAGATGCAGCAAGTGAGGAATTGAAGAACAGCCGGCTGTTCTTCAAACTCCTGGAAGCTGTTCTCAGGACAGGAAACAGAATGAACGTTGGCACCAATCGTGGCGATGCTAAATCTTTTAAACTGGATACACTACTAAAACTAGTAGACGTAAAGGGAACAGATGGAAAGACTACATTGCTCCACTTTGTGGTCCAGGAGATCATTAGATCTGAAGGTGAAGGTGCAGGCGGTGATTCTGCAAATAAGAATGTTCAGAACCAAATGATTTCCAATTTCAACGAGGATGAGTTCAAGAAGCAAGGATTGAAGGTTGTGGCTGGGCTCAGCAGAGATCTCAACAATGTCAAAAAAGCGGCAGGAATGGACTCAGATGTCTTAAGCAGCTATGTCTCAAAGCTTGAAATGGGGCTTGATAAAGTGAGGTTGGTTTTGCAATATGAAAGGCCTGATATGCAAGGGAATTTCTTCAACTCCACGAAGCTATTTCTGAAATATGCTGAAGAAGAGATTGTTAGGATTAAGGCTGATGAGAGAAAGGCCTTATTCCTTGTGAAAGAAGCTACAGAATACTTTCATGGGAATGTAGCAAAGGAAGAACCCCACCCTTTTAGAATCTTTATGATTGTAAGAGACTTTCTAAATATTTTGGATCAGGTGTGCAAAGAAGTGGGAAGTATGCAGGACAGAATTATGGTTGGTTCTGCGAGATCCTTCCGGATAGCTGCAAGTGCATCATTACCCGTTCTCAAAAAGTACAATGCAAGACAAGATAGAAGCTCAGATGAAGAAAGCTCATCACCATAG 2718 0.4753 MKVHHLNFFFFILLTVSFLVIPTAKGTDTIQFRTVNESRTRRFLHQPLFPETFAPPPGTESPPPPPPVTPPPPDTDIPFFHEYPVGPPPDQDQPPPSTSNDTVVNPTAIQAQTAKPRKKVAIAISVGIVTLGMLSALAFFLYRHRVKHPGNTQKLVLGNSQRIPDDSRAPPSSFLYIGTVEPIQTLASEPSETNEATKSPYRKLNSIKRSDRYRPSPELQPLPPLSKPPDGNNPPAISSSSSDEESHETAFHSPQGSSLSYEDSYYTPVSRQGYLANGSPAAPARTETHSTTSLPYSKRTSPKNRLSATSPDTRHAIIPSIKQAPPPPPPPPPPTTPFQHLDKQVTSGPSRRPKFSAPPPAPNLTHLQSTNNTPPKLSRTSLNPPPPPPPPPPPPPPPQTTPRKEGSPAISVSSSSASRKHQSWARSEGAASANSITKASWHVDKRLGSSEKLEADDTDEAKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGCNSTNAAPKESTRKSVLPPIDQEDRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNSEGLGSELLETLVKMAPTKEEEIKLRNYNGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDTEVNYLRKSFETLDAASEELKNSRLFFKLLEAVLRTGNRMNVGTNRGDAKSFKLDTLLKLVDVKGTDGKTTLLHFVVQEIIRSEGEGAGGDSANKNVQNQMISNFNEDEFKKQGLKVVAGLSRDLNNVKKAAGMDSDVLSSYVSKLEMGLDKVRLVLQYERPDMQGNFFNSTKLFLKYAEEEIVRIKADERKALFLVKEATEYFHGNVAKEEPHPFRIFMIVRDFLNILDQVCKEVGSMQDRIMVGSARSFRIAASASLPVLKKYNARQDRSSDEESSSP 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0377 905 PANTHER FORMIN-RELATED 363 899 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Glsi09g0377 905 ProSiteProfiles Formin homology-2 (FH2) domain profile. 455 880 IPR015425 -
Glsi09g0377 905 MobiDBLite consensus disorder prediction 321 338 - -
Glsi09g0377 905 MobiDBLite consensus disorder prediction 186 434 - -
Glsi09g0377 905 MobiDBLite consensus disorder prediction 217 231 - -
Glsi09g0377 905 SUPERFAMILY Formin homology 2 domain (FH2 domain) 387 865 - -
Glsi09g0377 905 MobiDBLite consensus disorder prediction 251 274 - -
Glsi09g0377 905 MobiDBLite consensus disorder prediction 50 95 - -
Glsi09g0377 905 MobiDBLite consensus disorder prediction 283 316 - -
Glsi09g0377 905 MobiDBLite consensus disorder prediction 186 201 - -
Glsi09g0377 905 Gene3D Formin, FH2 domain 449 865 IPR042201 -
Glsi09g0377 905 Pfam Formin Homology 2 Domain 457 854 IPR015425 -
Glsi09g0377 905 SMART it6_source 455 869 IPR015425 -
Glsi09g0377 905 MobiDBLite consensus disorder prediction 379 403 - -
Glsi09g0377 905 MobiDBLite consensus disorder prediction 362 378 - -
Glsi09g0377 905 MobiDBLite consensus disorder prediction 404 434 - -
Glsi09g0377 905 MobiDBLite consensus disorder prediction 46 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0377 Glsi-ChrGlsi09 2602410 2606444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0377 448 895 FH2 protein (formin) Gene Family AT5G67470 73.171 0.0 658