Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0375 ATGGGAGGGGAGTTTGCTACGGTGGTTGTTAGAGAGTTCGACCCAAATAAAGACAGGGGGAGAGTGGAAGCCGTTGAAAGGATATGTGAGGTTGGACCCAGTGGCAAGCTTTCCCTCTTCACCGACCTGCTTGGTGACCCAATTTGCAGGGTCCGCCACTCACCCGCTTTCCTCATGCTGGTGGCCGAGATTGGGCAAGAGATGGTAGGAATGGCAAGAGGTCTCATCAAAACCGTTACATGCGGAAAGAAGCTCTCCAGAAATGGAAAGAACACTCACTTCACGGACGACAATACAGACGCCTTCCAAGCTACTGCCAAACCCCTCCCTGTATACACCAAACTCGCCTACATATTAGGCCTTCGAGTTTCTCCTTCTCACCGGAGAAAGGGAATAGGATTGAAGCTGGTGCATAGAATGGAGGAGTGGTTCAGAGATCATGGCGCTGAATACTCGTATATAGCAACGGAAAACGACAACTTGGCATCCGTTAAGCTCTTCACCGACAAATGCGGATACTCAAAGTTCCGTACCCCCTCCATCCTTGTCAACCCCGTTTATGCTCATCGACTCAACCTCTCCCACAAGGTCACCATCATCCAACTCAACACCTCCGACGCAGAGTGCCTCTACCGCCGCCGATTTGCCACCACCGAGTTCTTCCCCCGCGACATTGACTCTGTCCTCAACAACAAACTCACCCTCGGCACATTCCTCGCCGTCCCACGTGGGTCCTACACTGCCCACACATGGCCCGGCTCCGATCGCTTCCTGTCGGGCCCACCCGAGTCCTGGGCAGTCATCAGCATCTGGAACTGTAAGGACGTTTTCACGCTCGAGGTCCGGGGCGCATCGCGCGTCAAGCGCACTCTTGCCAAAACGTCCCGGATAGTAGATCGGGCCTTACCGTGGCTGCAATTACCGTCGATTCCAAATTTTTTCAGGCCGTTCGGGTTCCACTTCATGTACGGACTGGGAGGCGAAGGCCCGCAGGCGGTGAAGATGGTGAATGCCTTGTGTGGGTTTGCACACAACCTTGCCAGAGAACGGGGGTGCGGGGTGGTGGCCACGGAGGTTTCCAGCCGCGAACCCCTGAGGTCTGGGATACCGCACTGGAAGATGCTATCTTGCGCCGAGGATTTATGGTGCATCAAGAGGCTTGGGGAAGACTACAGTGATGGCTCTGTCGGTGACTGGACCAAATCTCCTCCCGGACTGTCCATCTTTGTTGACCCCCGAGAGTTCTAA 1248 0.5489 MGGEFATVVVREFDPNKDRGRVEAVERICEVGPSGKLSLFTDLLGDPICRVRHSPAFLMLVAEIGQEMVGMARGLIKTVTCGKKLSRNGKNTHFTDDNTDAFQATAKPLPVYTKLAYILGLRVSPSHRRKGIGLKLVHRMEEWFRDHGAEYSYIATENDNLASVKLFTDKCGYSKFRTPSILVNPVYAHRLNLSHKVTIIQLNTSDAECLYRRRFATTEFFPRDIDSVLNNKLTLGTFLAVPRGSYTAHTWPGSDRFLSGPPESWAVISIWNCKDVFTLEVRGASRVKRTLAKTSRIVDRALPWLQLPSIPNFFRPFGFHFMYGLGGEGPQAVKMVNALCGFAHNLARERGCGVVATEVSSREPLRSGIPHWKMLSCAEDLWCIKRLGEDYSDGSVGDWTKSPPGLSIFVDPREF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0375 415 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 6 415 - -
Glsi09g0375 415 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 50 175 IPR016181 -
Glsi09g0375 415 CDD NAT_SF 104 151 - -
Glsi09g0375 415 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 194 IPR000182 GO:0016747
Glsi09g0375 415 FunFam Probable N-acetyltransferase HLS1-like 17 180 - -
Glsi09g0375 415 Gene3D - 41 179 - -
Glsi09g0375 415 Pfam Acetyltransferase (GNAT) family 53 173 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0375 Glsi-ChrGlsi09 2578668 2580358 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Glsi09g0375 Acetyltransf_1 5.1e-17 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1697 05 64962668 64966142 Glsi09g0375 09 2578668 2580358 CCT
Glsi09g0375 09 2578668 2580358 Glsi09g0375 09 2578668 2580358 ECH