Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0364 ATGGATACCTTGTTTAGGCTAGTTAGTTTTCAACATCAACAACCCGATCAATCCCTCAACTCCACCAGCAGAACTTCTAGCAGCTCTAGATCCTCCAGACAAAACTATCACTACCACCAACAAGAGGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACTTGTCCTCGTCTTCTTCTAAGCACTACTATCAGCCCCACACTAGCACTAACACAAGCACCCCCTCCGCCACTGATTTCTCTGTCTCGCCCAACCCTGACTTCAACTTTGAATTCTCCGGCGACTGGGCTCCCGATATCCTCCTCGAAACCGCACGTGCCATTGCCGACAAGAACAGCGCTCGTGTCCACCAACTCATGTGGATGCTTAATGAGCTCAGCTCCCCTTACGGTGACACCCATCAAAAGCTCACAGCCTACTTCCTCCAAGCCTTGTTTAGCCGCATCACTGATTCCGGTGACCGTACATATCGTACCCTGACCTCTGCATCCGAAAAAACATGCTCTTTCGAATCAACCAGGAAGATGGTCTTGAAGTTCCAAGAAGTCAGCCCTTGGACAACCTTTGGTCATGTCGCTTGCAATGGTGCTATCTTGGAGGCCTTCGAGGGTGAGCCAAAGTTACACATAGTTGATATTAGCAACACATATTGCACCCAATGGCCTACCCTGCTTGAGGCCTTGGCCACTCGCAGCGATGACACTCCTCACCTCCGTTTAACCACCGTGGTCTCCCGGAGAGCCGGTGGTTCCGTGACGGCGGTTCAAAAAGTCATGAAGGAAATAAGAACTAGGATGGAGAAATTTGCTCGGCTAATGGGTGTGCCCTTCAAATTCAACGTCATTCATCATGCCGGTGATCTTTCAGAGTTAAATTTTTCCGAGTTAGACCTTAAAGACGACGAGGCTTTAGCTATTAACTGTGTGAATGCTTTGCATTCTATCACAGCCGTGGGTGATCAGCGGGAAATGTTGATATCTTCGTTTCGGAGATTACAACCTAGGATAATCACGGTGGTTGAAGAAGAAGCTGATCTTGATGTGGGTTTTGAGGGTTTTGAGTTCGTGAAAGGTTTCCAAGAATGCTTAAGATGGTTTAGGGTTTATTTCGAGGCATTGGACGAGAGCTTCCCAAGGACAAGCAACGAGCGCTTGATGCTTGAACGAGCGGCGGGACGAGCCATGGTTGATTTGGTGGCTTGTAGTCCATCGCAGTCGGTAGAGCGGCGTGAGTCGGCGGCTCGCTGGACGCAGCGTCTGCATGTTGGGGGGTTCAACCCGGCGTCTTTTAGCGAGGAAGTTTGCGACGATGTGAGAGCACTGTTGAGGAGGTACAAGGAGGGGTGGTCAATAACACAGTGCTCCGATGCCGGAATATTCTTGTCGTGGAAGGACCAGCCGGTGGTGTGGGCCAGTGCATGGAGGCCTTGA 1431 0.5003 MDTLFRLVSFQHQQPDQSLNSTSRTSSSSRSSRQNYHYHQQEEECFNFFMDEEDLSSSSSKHYYQPHTSTNTSTPSATDFSVSPNPDFNFEFSGDWAPDILLETARAIADKNSARVHQLMWMLNELSSPYGDTHQKLTAYFLQALFSRITDSGDRTYRTLTSASEKTCSFESTRKMVLKFQEVSPWTTFGHVACNGAILEAFEGEPKLHIVDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVSRRAGGSVTAVQKVMKEIRTRMEKFARLMGVPFKFNVIHHAGDLSELNFSELDLKDDEALAINCVNALHSITAVGDQREMLISSFRRLQPRIITVVEEEADLDVGFEGFEFVKGFQECLRWFRVYFEALDESFPRTSNERLMLERAAGRAMVDLVACSPSQSVERRESAARWTQRLHVGGFNPASFSEEVCDDVRALLRRYKEGWSITQCSDAGIFLSWKDQPVVWASAWRP 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0364 476 ProSiteProfiles GRAS family profile. 88 475 IPR005202 -
Glsi09g0364 476 MobiDBLite consensus disorder prediction 12 36 - -
Glsi09g0364 476 Pfam GRAS domain family 100 475 IPR005202 -
Glsi09g0364 476 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 73 468 IPR005202 -
Glsi09g0364 476 MobiDBLite consensus disorder prediction 59 79 - -
Glsi09g0364 476 MobiDBLite consensus disorder prediction 12 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0364 Glsi-ChrGlsi09 2536101 2537531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0364 1 476 GRAS Transcription Factor Family AT4G37650 60.902 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi09g0364 GRAS 6.4e-106 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g0364 09 2536101 2537531 Glsi09g0364 09 2536101 2537531 ECH