LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi09g0358	ATGGCGGCTTTCTTATCGAGCTCTTGCATATCACTTCAAAATCCTCGTAAATTATCACATTTCCATGTTTTTGATGAACTATGCTGTCCTTCTCACCATATCCACCTTCAAGTTAAGGTGAGATTTCGTTCCCCGGACCACTTAGCTTTAACGGCCGATGCAGTAACGAAGCGTAGGAAGGGATTCTCAAATAAATGCAATGTGTTTAGCGAAGAAGTGAATGAGAGCTACAATTCTGCTGAGGATAAGCAATTTGTGCGTTGGTTTCGTGAGGCCTGGCCTTACTTGTGGGCCTATAGGGGCGGCACCTTTGTGGTGATTATTTCCGGTGAAATTGATATAGCTTTCCTTCATCAATTGGGAATTCGGTTTGTTCTTGTTCCGGGGACCCATGTGCAAATAGACAAGCTTTTGACTGACAGAGGAAGTCAGCCTAAGTATGTTGGTCCTTATAGGATAACTGATGATGAATCCCTAGCAGCGGCAATGGAAGCAGCTGGGAGAATAAGGTTGATGATAGAAGCAAAACTTTCTCCCGGACCCTCTATGTGCAACATTCGTCGACATGGTGACAATAGTCGTTGGCATGAAGTTGGTGTCACCGTTGCCGGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGAGTTGTTGATGGAATTGATTATGGGGCAACTGGGGAAGTTAAAAAAGTAGATGTTTCTCGCATGCGTGAGAGGCTTGATGGTGGTTGTATAGTTATTTTAAGCAACCTGGGATACTCCAGCGCTGGAGAAGTATTAAATTGCAACACCTACGAAGTTGCAACAGCTTGTGCCTTAGCAATTGGAGCGGACAAGCTTATTTGCATTATAGATGGTCCGATACTCGATGACAGTGGACGTCTAATTCGCTTCTTGCCTCTTAAAGATGAAGACATGTTAATTCGTAAACACGCCGAGCAAAGTGAAACGGCTGCTAACTATGTGAAAGTTGTTGATGAAGAAGGCTTCAGCTTTCTTGGGTATAACAATTCTAATGGGATGGTCCATCGTCCACAGAATGGAAAGGCTTTTACAGGAAGGCATAATGCAACCTTTCATAATGGTGTTGGTTTCGACAATGGGAGTGGCCTATGGTCTGGTGAACAAGGTTTTGCTATCGGAGGTCAGGAGCGGCTAATTCGAATGCATGGTTACCTGTCAGAATTGGCCGCTGCTGCTTTCGTTTGCAGAGGCGGTGTTAAAAGAGTTCACTTGTTGGATGGAACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAGAGAGATGGGATGGGAACAATGGTGGCTAGTGACCTTTACGAAGGCACTCGGATGGCTCAGGTAACAGATATTTCTGGAATAAAAAAAATTATTCGGCCTTTGGAAGCATCTGGAATATTGGTTAAGCGGACTGATGAAGAGTTGCTTCAATCATTGCATTCCTTGATGGTTGTGGAAAGAGAAGGTCAAATAATTGCTTGTGCTGCACTCTTTCCTTTCTTTGAGGAGAAGTCTGGGGAGGTTGCTGCCATTGCGGTATCTCCTGACTGTCGAGGCCAAGGACAGGGAGACAAATTGCTTGATTTTATTGAGAAAAAGGCATCGTCTCTTGGATTAAATATGCTTTTTCTGCTTACAACTCGTACAGCAGATTGGTTTGTGAGGCGTGGATTTTCGGAATGTTCAATTGATTCTATACCGGAGAAGAGAAGGAAAAAAATCAATTTGTCTCGCAACTCCAAGTATTACATGAAGAAGCTTCTACCTAATAAAAGTGGAATTACTGTTGATAGAAATTTTGCTTCAGATTAG	1809	0.4317	MAAFLSSSCISLQNPRKLSHFHVFDELCCPSHHIHLQVKVRFRSPDHLALTADAVTKRRKGFSNKCNVFSEEVNESYNSAEDKQFVRWFREAWPYLWAYRGGTFVVIISGEIDIAFLHQLGIRFVLVPGTHVQIDKLLTDRGSQPKYVGPYRITDDESLAAAMEAAGRIRLMIEAKLSPGPSMCNIRRHGDNSRWHEVGVTVAGGNFLAAKRRGVVDGIDYGATGEVKKVDVSRMRERLDGGCIVILSNLGYSSAGEVLNCNTYEVATACALAIGADKLICIIDGPILDDSGRLIRFLPLKDEDMLIRKHAEQSETAANYVKVVDEEGFSFLGYNNSNGMVHRPQNGKAFTGRHNATFHNGVGFDNGSGLWSGEQGFAIGGQERLIRMHGYLSELAAAAFVCRGGVKRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDISGIKKIIRPLEASGILVKRTDEELLQSLHSLMVVEREGQIIACAALFPFFEEKSGEVAAIAVSPDCRGQGQGDKLLDFIEKKASSLGLNMLFLLTTRTADWFVRRGFSECSIDSIPEKRRKKINLSRNSKYYMKKLLPNKSGITVDRNFASD	602

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi09g0358	602	Pfam	Amino acid kinase family	114	301	IPR001048	-
	Glsi09g0358	602	Gene3D	-	83	439	IPR036393	-
	Glsi09g0358	602	SUPERFAMILY	Carbamate kinase-like	387	436	IPR036393	-
	Glsi09g0358	602	SUPERFAMILY	Acyl-CoA N-acyltransferases (Nat)	443	590	IPR016181	-
	Glsi09g0358	602	Gene3D	-	440	586	-	-
	Glsi09g0358	602	ProSiteProfiles	Gcn5-related N-acetyltransferase (GNAT) domain profile.	440	588	IPR000182	GO:0016747
	Glsi09g0358	602	Pfam	Acetyltransferase (GNAT) family	480	545	IPR000182	GO:0016747
	Glsi09g0358	602	CDD	NAT_SF	483	543	-	-
	Glsi09g0358	602	SUPERFAMILY	Carbamate kinase-like	83	307	IPR036393	-
	Glsi09g0358	602	CDD	AAK_NAGS-ABP	84	434	IPR033719	-
	Glsi09g0358	602	NCBIfam	amino-acid N-acetyltransferase	395	586	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Glsi09g0358	602	Hamap	Amino-acid acetyltransferase [argA].	84	586	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Glsi09g0358	602	PANTHER	AMINO-ACID ACETYLTRANSFERASE	70	594	IPR010167	GO:0004042\|GO:0005737\|GO:0006526

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi09g0358	Glsi-ChrGlsi09	2500123	2504915	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	GNAT	Glsi09g0358		AA_kinase	1.3e-07	No_clan

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Glsi05g1717	05	65077330	65083921	Glsi09g0358	09	2500123	2504915	CCT