Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0354 ATGTCAGTCTCCCCAAACCACCTAGCTCTCGACTTATACTGCGATGAGGCAGCTAGCGAGGTGGTTTCCTTCGATTCCAACACTGCTAACTATGAATCCGAGGCGGGTTTGAATGCTGTATGGGAATCCGAGCATGAAAGCAGCTGTGTGTTGACCTTATTGGACTCCGAACTTGATCAAATGCCGGAAAGACAGCAATCACTGGGACAACTTCGCAAAAAAACGTGGCTCAGAACTGCTCGAGAAGAAGCCATATATTGGATACTGAAGGTGCAAGCTTACTACAGTTTTAGACCTGAGACGGCATATCTTTCTGTAAACTATCTTGATCGTTTTCTTTTATCGCACTCATTGCCGCAAGATAAAGGCTGGTCTCTGCAGCTGCTGTCAGTTGCTTGCCTGGCACTGGCAGCAAAAATGGAAGAAACAAGCGTGCCCCTTTTATTGGACTTGCAGATGATGGAGCCCAGGTTCCTGTTTAAGCCTAAAACAGTTCAAAGGATGGAGCTTTTGGTCATGGCCAGTCTCAGGTGGCGATTGCGCGCTATAACTCCTTTTGATTTTGCTCATCTATTCATGGCTAAGCTGTCACGCTCTGCTTCCCTAATGGGCGGTTCCAATCACATTATTGCTCGTCTCTCAGATGTTATTATCAGAACATGTTTAGCAATAGATTTCTTAGAGTATCCTCCGTCCACAATAGCAGCAGCTGCCCTGCTATGGGCTACTGATCAAGATGTTGATGACCAGGATTTAACTTTCTTCCACAAAAATATAAACACAGAGATGGTGCAGAAATGTTACAAATCTATGAAGCAGAAAATTCTCCAATCACAGCATTTTGTGTCGAAGAAACTAGAGTCATTGCCCCGAAGTCCTACTTGTGTGCTTGATAATGCAGCTATGCTTGACAGCAGCGAGGCTCACAAGCCCTGA 936 0.453 MSVSPNHLALDLYCDEAASEVVSFDSNTANYESEAGLNAVWESEHESSCVLTLLDSELDQMPERQQSLGQLRKKTWLRTAREEAIYWILKVQAYYSFRPETAYLSVNYLDRFLLSHSLPQDKGWSLQLLSVACLALAAKMEETSVPLLLDLQMMEPRFLFKPKTVQRMELLVMASLRWRLRAITPFDFAHLFMAKLSRSASLMGGSNHIIARLSDVIIRTCLAIDFLEYPPSTIAAAALLWATDQDVDDQDLTFFHKNINTEMVQKCYKSMKQKILQSQHFVSKKLESLPRSPTCVLDNAAMLDSSEAHKP 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0354 311 FunFam D6-type cyclin 64 177 - -
Glsi09g0354 311 SUPERFAMILY Cyclin-like 40 180 IPR036915 -
Glsi09g0354 311 Gene3D - 63 181 - -
Glsi09g0354 311 SMART Cyclin_C_2 183 306 IPR004367 -
Glsi09g0354 311 Pfam Cyclin, C-terminal domain 183 277 IPR004367 -
Glsi09g0354 311 PANTHER CYCLINS 64 275 IPR039361 -
Glsi09g0354 311 FunFam D6-type cyclin 178 269 - -
Glsi09g0354 311 ProSitePatterns Cyclins signature. 81 112 IPR006671 -
Glsi09g0354 311 Gene3D - 53 270 - -
Glsi09g0354 311 SMART cyclin_7 86 174 IPR013763 -
Glsi09g0354 311 CDD CYCLIN_AtCycD-like_rpt2 183 271 - -
Glsi09g0354 311 SUPERFAMILY Cyclin-like 165 288 IPR036915 -
Glsi09g0354 311 CDD CYCLIN_AtCycD-like_rpt1 80 178 - -
Glsi09g0354 311 Pfam Cyclin, N-terminal domain 54 180 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0354 Glsi-ChrGlsi09 2477889 2479166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0354 1 286 Core Cell Cycle Gene Families AT1G70210 37.201 4.13e-59 191