Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0309 ATGAGGCTCTTCCTCTTGCTTCTTCTCCTTCTCCTTCTCCGATACTCCCTCTCTGCTCCTATCTCCGAGTACCGCGCCCTCCTTTCTTTTAGGGCCGCCATTACCGACGACCCCCAGTCCGCTCTTTCCTCCTGGAATGCCTCCACCACCCACTGTACCTGGTCTGGTGTCACCTGCGACTCCCGCCGCCACGTTACCGCTCTTAACCTCACCGGCCTTAACCTCTCTGGTACACTCTCCAACGACATCGCTCATCTCCCATTCCTCTCTAACCTCTCCGTCGCCGTTAATCAGTTCTCTGGACCAATCCCGGTCGGGATTTCTGTCATCGCTGGCCTCCGATTACTCAACCTTTCCAACAATGTGTTCAACGGCACTTTCCCTGCCGAGCTTTCCCAGCTCAAGAGTCTTCGGGTCCTTGACCTTTATAACAACAACATGACTGGAGAACTCCCGCTCGTCGTCACACAGATGCCGAATCTCCGCCATTTGCATCTTGGAGGGAATTTTTTCGAGGGTCAGATCCCACCGGAGTACGGGCGGTGGCAACGCTTGGAATACTTGGCTATTTCCGGTAATGAGCTGGCCGGCACAATACCGCCCGAGATCGGCAACTTGACCCATCTCCGGGAGCTCTATATCGGATATTACAACACTTACGAGGGTGGTATACCACCTGAAATTGGCAACTTGTCGGAATTAGTAAGGTTCGACGCGGCAAACTGTGGATTAACCGGCGAGATGCCGCCCGAACTCGGGAAGCTTCAAAAGCTCGATACATTATTTCTTCAAGTCAATGCGCTTTCAGGGTCTCTGACGCCCGAGCTCGGTAACTTGAGGAGCTTGAAATCCATGGATTTGTCCAACAATATGCTTGCGGGTGAGATTCCGGAGAGTTTTGCCGAGCTGAAGAACCTGACGCTTTTGAACCTGTTCAGAAATAAGCTTCACGGAGCCATTCCTGTGTTCATTGGTGAACTACCTTCTTTGGAGGTTCTACAGCTTTGGGAGAATAACTTCACTGCGATCATACCTCAGGGTTTGGGGCAGAACGGGAGGCTTGTGCTTGTTGATCTTTCGTCAAACAAATTGACTGGTACTTTGCCTCCTGATATGTGCAATGGGAATCATCTTCAGACTTTAATAACTCTCGGAAATTTCCTATTTGGTCCTATCCCTGAATCGCTTGGAAGGTGCGAGTCGCTAACTCGAATTCGTATGGGAGAGAACTTTCTGAATGGGTCAATTCCGAAAGGCCTTTTTGGGCTTCCCAAACTTTCACAGGTTGAACTCCAGGACAATCTTCTCTCGGGACAATTTCCTGAGACGGGTTCCATTTCTGTTAATGTTGGCCAGATTAGTCTGTCTAATAACCAGCTTTCTGGGTCGTTGCCGCCGACAATAGGTAACTTTTCCGGAATGCAGAAGCTCCTTCTTGACGGAAACAAGTTCTCAGGTCGAATACCTCCTGAGATTGGGAGGTTACAGCAGCTTTCAAAGATAGATTTTAGCCATAACAAGTTGTCAGGCCCTATCGCGCCAGAAATCAGTCAATGCAAGCTATTGACATTCCTTGATCTTAGTCGTAATGAGCTTTCTAGTGAGATTCCGAATGAGATCACCGGTATGCGGATACTGAATTACTTGAATCTTTCTAGAAATCATCTCGTTGGTAGCATTCCCGCATCAATAGCAAGTATGCAAAGTTTAACTTCTGTCGATTTTTCATATAATAATCTCTCTGGTTTGGTTCCTGGCACCGGGCAATTCAGTTACTTCAACTACACATCCTTCCTGGGCAACCCTGAACTTTGTGGCCCGTATTTAGGTCCTTGCAAGGACGGGGTTGCCAATGGCGCCCACCAACCCCATGTTAAAGGTCCACTCTCTGCTTCTTTGAAGCTTCTGCTGGTTATTGGGTTGCTTGTATGTTCGATTGCATTTGCAGTTGCTGCAATAATTAAAGCACGGTCATTGAAGAAGGCGAGTGAAGCTCGCGCTTGGAAATTGACAGCATTCCAGCGCTTGGACTTCACTGTTGACGATATTTTGGATAGCTTGAAGGAGGACAACATAATTGGTAAAGGAGGTGCAGGCATTGTCTACAAGGGTGCAATGACGATTGGGGATCAGGTTGCTGTAAAAAGGCTACCAGCTATGAGCAGAGGCTCTTCTCATGATCATGGATTCAATGCGGAGATCCAGACACTGGGGAGAATCCGACACAGACACATTGTTAGATTATTGGGTTTCTGTTCAAACCATGAAACTAATCTTTTGGTCTACGAATACATGCCTAACGGAAGTTTAGGTGAAGTTCTTCATGGTAAGAAAGGTGGTCATTTGCATTGGGACACAAGGTATAACATTGCCGTGGAGGCTGCAAAGGGGCTTTGCTATCTACATCATGACTGTTCACCGCTTATCGTCCATCGAGATGTAAAATCAAACAATATCCTTCTTGACTCCAATTTTGAAGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTTCTGCAAGATTCTGGAACATCTGAATGCATGTCTGCTATTGCCGGTTCATATGGATACATAGCTCCTGAATATGCCTACACACTGAAAGTTGATGAGAAAAGCGATGTGTACAGCTTTGGTGTGGTTCTTTTAGAGCTTATAACGGGTAGGAAACCGGTTGGGGAATTTGGTGATGGTGTGGACATAGTGCAATGGGTCAGGAAAATGACGGACTCGAACAAGGAAGGAGTTCTAAAAGTGCTTGATCCTAGACTTCCCTCTGTTCCTCTTCATGAGGTGATGCATGTTTTCTATGTAGCCATGCTTTGTGTTGAAGAACAGGCCGTAGAGCGACCAACAATGCGAGAGGTTGTTCAAATTCTAACCGAGCTTCCAAAGCCACCTAATTCAAAACAGGGAGACTTTACCATCACGGAGTCCTCTCTGTCATCATCAAACGCTCTAGATTCTCCAACCACAGCGTCTAAAGAACATAAAGATCATCAACGTCCTCCTCAATCGCCACCACCCGATCTTCTTAGCATTTGA 3039 0.4719 MRLFLLLLLLLLLRYSLSAPISEYRALLSFRAAITDDPQSALSSWNASTTHCTWSGVTCDSRRHVTALNLTGLNLSGTLSNDIAHLPFLSNLSVAVNQFSGPIPVGISVIAGLRLLNLSNNVFNGTFPAELSQLKSLRVLDLYNNNMTGELPLVVTQMPNLRHLHLGGNFFEGQIPPEYGRWQRLEYLAISGNELAGTIPPEIGNLTHLRELYIGYYNTYEGGIPPEIGNLSELVRFDAANCGLTGEMPPELGKLQKLDTLFLQVNALSGSLTPELGNLRSLKSMDLSNNMLAGEIPESFAELKNLTLLNLFRNKLHGAIPVFIGELPSLEVLQLWENNFTAIIPQGLGQNGRLVLVDLSSNKLTGTLPPDMCNGNHLQTLITLGNFLFGPIPESLGRCESLTRIRMGENFLNGSIPKGLFGLPKLSQVELQDNLLSGQFPETGSISVNVGQISLSNNQLSGSLPPTIGNFSGMQKLLLDGNKFSGRIPPEIGRLQQLSKIDFSHNKLSGPIAPEISQCKLLTFLDLSRNELSSEIPNEITGMRILNYLNLSRNHLVGSIPASIASMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPELCGPYLGPCKDGVANGAHQPHVKGPLSASLKLLLVIGLLVCSIAFAVAAIIKARSLKKASEARAWKLTAFQRLDFTVDDILDSLKEDNIIGKGGAGIVYKGAMTIGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYNIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPNSKQGDFTITESSLSSSNALDSPTTASKEHKDHQRPPQSPPPDLLSI 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0309 1012 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 80 323 - -
Glsi09g0309 1012 Pfam Leucine rich repeat N-terminal domain 22 60 IPR013210 -
Glsi09g0309 1012 ProSiteProfiles Protein kinase domain profile. 687 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0309 1012 MobiDBLite consensus disorder prediction 965 1012 - -
Glsi09g0309 1012 SUPERFAMILY RNI-like 68 389 - -
Glsi09g0309 1012 Gene3D Transferase(Phosphotransferase) domain 1 765 978 - -
Glsi09g0309 1012 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 765 975 - -
Glsi09g0309 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Glsi09g0309 1012 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 17 79 - -
Glsi09g0309 1012 MobiDBLite consensus disorder prediction 965 989 - -
Glsi09g0309 1012 SUPERFAMILY L domain-like 352 612 - -
Glsi09g0309 1012 SUPERFAMILY Protein kinase-like (PK-like) 679 958 IPR011009 -
Glsi09g0309 1012 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 331 616 - -
Glsi09g0309 1012 Gene3D Phosphorylase Kinase; domain 1 651 764 - -
Glsi09g0309 1012 Gene3D Ribonuclease Inhibitor 212 370 IPR032675 -
Glsi09g0309 1012 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 656 764 - -
Glsi09g0309 1012 SMART LRR_typ_2 327 351 IPR003591 -
Glsi09g0309 1012 SMART LRR_typ_2 279 302 IPR003591 -
Glsi09g0309 1012 SMART LRR_typ_2 158 182 IPR003591 -
Glsi09g0309 1012 SMART LRR_typ_2 134 157 IPR003591 -
Glsi09g0309 1012 SMART LRR_typ_2 495 519 IPR003591 -
Glsi09g0309 1012 SMART LRR_typ_2 567 590 IPR003591 -
Glsi09g0309 1012 SMART serkin_6 687 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0309 1012 Pfam Protein tyrosine and serine/threonine kinase 689 958 IPR001245 GO:0004672|GO:0006468
Glsi09g0309 1012 Pfam Leucine Rich repeats (2 copies) 135 169 IPR025875 -
Glsi09g0309 1012 Gene3D Ribonuclease Inhibitor 371 613 IPR032675 -
Glsi09g0309 1012 Gene3D Ribonuclease Inhibitor 21 211 IPR032675 -
Glsi09g0309 1012 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 160 953 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0309 Glsi-ChrGlsi09 2203710 2207197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0309 15 988 Receptor kinase-like Gene Family AT5G65700 82.161 0.0 1620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi09g0309 PK_Tyr_Ser-Thr 2.5e-46 CL0016