Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0297 ATGGCTGGTCTGGATTTAGGCACTGCTTCTCGCTTTGTTCAAAATCTTCACATACCCGACTTGCACCTTCAGCAACGTCCGCCCCAGCAGCACCAACATCAACCCGATTCCGATGATGATGCCGATCGGGCTGCCCCGTTTTCCACCGAGGATGGTCCCAACCAAGTCCTCGAGCTTACCTCCACCGGTCCCGGTGACATCGTCGCCCGTCGACCCCGTGGCCGCCCAGCCGGTTCCAAGAACAAACCCAAACCACCCGTCATAATAACTAGAGAGAGCGCCAACACGCTCCGGGCTCATATTCTGGAAGTGGGCAACGGCTGCGATGTGTTCGACAGCGTCGCCACCTACGCGCGCCGCCGACAGCGGGGGATCTGTATTCTCAGCGGCAGTGGCACTGTTACCAATGTGAGCTTAAGGCAACCGGCAGCGGCAGGAGCCATAGTGAGCCTTCACGGGAGGTTCGAGATACTGTCTTTGTCGGGATCGTTCCTGCCGCCACCAGCGCCACCGGGCGCGACGAGCCTGACGATATACCTGGCGGGAGGGCAGGGACAAGTAGTGGGAGGGAGTGTGGTGGGGGAGTTGACCGCTGCAGGACCGGTTATTGTGATAGCTGCTTCGTTTACGAACGTGGCGTACGAGAGGTTACCGCTGGATGAGGAGGAGCAGCTTCAGATACAGACACCAGCGTCCCAGGGTTCGGGTGGCGGAGGAGGTGTGGGGAACAACCCATTTCCGGACCCATCGTCTGGTTTGCCCTTCTTCAATTTGCCTCTTAATATGCAGAATATTCAGTTGCCAGTTGATGGGTGGACGGCTAACTCAGCTGCGCGTCCGCCATTTTAA 849 0.583 MAGLDLGTASRFVQNLHIPDLHLQQRPPQQHQHQPDSDDDADRAAPFSTEDGPNQVLELTSTGPGDIVARRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFDSVATYARRRQRGICILSGSGTVTNVSLRQPAAAGAIVSLHGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLDEEEQLQIQTPASQGSGGGGGVGNNPFPDPSSGLPFFNLPLNMQNIQLPVDGWTANSAARPPF 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0297 282 MobiDBLite consensus disorder prediction 23 87 - -
Glsi09g0297 282 Pfam Plants and Prokaryotes Conserved (PCC) domain 98 211 IPR005175 -
Glsi09g0297 282 FunFam AT-hook motif nuclear-localized protein 97 224 - -
Glsi09g0297 282 Gene3D - 97 233 - -
Glsi09g0297 282 ProSiteProfiles PPC domain profile profile. 94 231 IPR005175 -
Glsi09g0297 282 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 31 232 IPR014476 GO:0003680
Glsi09g0297 282 MobiDBLite consensus disorder prediction 229 248 - -
Glsi09g0297 282 MobiDBLite consensus disorder prediction 32 46 - -
Glsi09g0297 282 CDD DUF296 98 181 IPR005175 -
Glsi09g0297 282 SUPERFAMILY AF0104/ALDC/Ptd012-like 94 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0297 Glsi-ChrGlsi09 2127638 2128486 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0297 1 282 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 65.385 2.73e-101 296