Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0289 ATGGGAGGGGCATCATTGCCGCCAGGTTTTCGTTTCCACCCAACTGATGAAGAACTGATTGGATACTATCTAAAGAGAAAAGTCGAGGGGCTTGAAATTGAGCTGGAAGTTATCCCCGTAATTGATTTTTACAAATTTGATCCATGGGAGCTGCCGGAGAAATCGTTCCTGCCAAAACGAGATTTAGAATGGTTTTTCTTCTGTCCCCGGGATCGAAAGTACCCAAATGGATCACGAACAAATAGGGCTACCAAAGCTGGCTACTGGAAAGCCACCGGAAAAGACAGGACGGTAGTCTGCCACTCTGTCACAGGGTACCGGAAGACCCTGGTTTTCTATCGTGGAAGAGCCCCTTTAGGGGATCGAACCGACTGGGTCATGCATGAGTATCGCCTCTGCGATGATCTTGCCCAAGGATCACCAAGTTTTCAGGGTGCTTTTGCTTTGTGCCGGGTTATTAAAAAGAATGAGAAGGGCAAAAGATCAGCTGGAAGCAGTTCCAACAATGGGAATGAAACCTCAATGAGGATCTCCAACGGGACCTTGAGCATCTCTGCTGACGTTTCGTCTCAAGCAAGTCCTATTACTTCTCCATGCCGTGTGGCTCCAACGACAGCAGAGCTTGAGCATGCTTCCATGGAATTCAACCCTTCAAATTTCGAGGTCTCCCCTGATTTGATTCTTGATTCTTCCAAGGACTACCCTCAAATACAAGATGCGGTGTCTGGATACTTTCCACAGTACGACTTATCAAGTTCAATGACACCATGGCCCTCATTCGAGCACACAGAAATTTCACCCTGTTCATCCTACTCAAATTTAAATGGAGAAATTGAATTTGCTGAAGATCTCAGTGGAATTGGCTGCATGCCACCCTACTCAGGACAAGGAAACTTGATGGACTTTTATGGAAATGAGGATGTGTCTTATGAAATCAGAAATCTAAAACCTTTCTGA 957 0.4577 MGGASLPPGFRFHPTDEELIGYYLKRKVEGLEIELEVIPVIDFYKFDPWELPEKSFLPKRDLEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRTVVCHSVTGYRKTLVFYRGRAPLGDRTDWVMHEYRLCDDLAQGSPSFQGAFALCRVIKKNEKGKRSAGSSSNNGNETSMRISNGTLSISADVSSQASPITSPCRVAPTTAELEHASMEFNPSNFEVSPDLILDSSKDYPQIQDAVSGYFPQYDLSSSMTPWPSFEHTEISPCSSYSNLNGEIEFAEDLSGIGCMPPYSGQGNLMDFYGNEDVSYEIRNLKPF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0289 318 ProSiteProfiles NAC domain profile. 6 155 IPR003441 GO:0003677|GO:0006355
Glsi09g0289 318 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 209 - -
Glsi09g0289 318 FunFam Nac domain-containing protein 86 15 158 - -
Glsi09g0289 318 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Glsi09g0289 318 Pfam No apical meristem (NAM) protein 7 132 IPR003441 GO:0003677|GO:0006355
Glsi09g0289 318 SUPERFAMILY NAC domain 4 155 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0289 Glsi-ChrGlsi09 2057296 2058729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0289 1 279 NAC Transcription Factor Family AT4G17980 59.298 7.57e-111 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi09g0289 NAM 4.8e-38 No_clan