Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0286 ATGGGAGGTGGACTTTCGAAACTCTTTTCTTGCTTCAAACCGGTTAACCGGACGACCAACCAACCGGACCAACAGGACGTGATTTTTGCGGCCACTGACCCCTTGGACGAAACCCTAGGCCACTCCTTCTGCTACGTCAGATCTTCTGCTCGCTTTATTTCGCCCACTCACTCGGATCGCTTTGTCTCTCCTTCCAACTCCCTCCGTTTCTCTCCCACTCACGAACCCGTTTCCAGAGAACGCCCCGATTTCCCCGAAACCGGATTCAAGGCCATTTCCGGAGCGTCGGTCAGTGCCAACAATTCGACTCCTAAAACTGTTCTCCAGCTAGACGATATCTACAATGATGCTACTGATGATAACGTCCTTGGTGGTGGCGTGAGGGGAAGTATTGTAAATGGATTCGAAAGCACATCTTCATTTAGTGCCCTCCCGCTTCAGCCGGTGCCGAGAGGGGGTGAACACTCGGGTCCGGTAGAGAGGGGAGCTTTCTTTCTCTCGGGTCCAATTGAGCGTGGTGCCCTCTCGGGGCCTCTTGAGGCGAACGCCACCACGGAAGACGGGGGTGGGGTCCCTTTCTCCGCCCCTCTGGGAGGCTTTTATGTCAAAAGGAAGCGGAAGAAACGTATTTCGAGGTTTCGAAAGGCATTCCACCGGAACCTCTCGGAGAAGAACCGGCCGTGGGTCGTGCCAGTGTTGAATTTTGTCGGCAGAAAGGAAAGTTCGTCGAACGAAGAGAAGCCGGAGGTGAAGAGTGAGAATAATGTACAGTGGGCGCTTGGAAAGGCTGGAGAGGATAGGGTACATGTGGTTGTATCAGAAGAGCACGGCTGGCTGTTTGTTGGGATTTATGACGGCTTTAATGGCCCTGACGGACCAGAATTTCTAATGGGTCATCTTTACCGTGCTGTTTACAATGAGCTCAGGGGTTTATTTTGGGATATTGAAGAGGGAGAGGAAACTATTCCATTGGCTGCTGAAAATGCGGTGCTTGGAGGGGAAACTGAATCTTCAATGGGAAACTCCCGCGAAGAGTTAAAAGATGAGGGGGAAGTTTGTGGAGATGATTCCAATCCTCTGCCGCTTGATCGAGGATCGGCAAAGAGAGTTACGTTTCAAGCCGAGGGAACTGAAAGTAGGCGGCGTAGGTTATGGGAATTTCTCGCCGAAGAAGATCCTGAAGACGGGCTTGATCTTTCAGGGTCAGATAGATTTGCATTTTCCGTTGATGATGCACTCAGCGTTAGCAATGCGGGCTCAACCGTTGGTAGACGGTGGCTATTGCTGTCAAAATTGAAGCTTGGATTATCAAAGCATAAGGAGGGTCGTGGTAGGAAGTTGTCACCCTTGAACTTCGGCACAGAGGATAAAGAGAAGATTGACTCAGAAAATCGGGCTGAAGAGAAGTCTTTTCGTGGTAGTAGGAAGCGGAAAGTGGGCCCCGTGGATCATGATTTAGTTTTGAGGGCATTGTCTCGGGCTCTTGAAGTGACCGAACTTGCATATTTGGACATGACGGATAAGGTTCTTGGTACAAACCCGGAGCTCGCATTAATGGGGTCTTGTCTGTTAGTTGTTTTAATGAGGGATGAGGATGTGTACGTGATGAACGTGGGAGATAGCCGAGCCATTGTTGCACAATATGAGCCCAAAGAGGTTAAATCTACTATGGAATTGAGATGCAGGGGAAATAATGGTTCAAGCATTGAGAGCATAGTTGAGGAATCCTTGGCTCTAGGTGAAAGTGCAACCAAGTTGGGGAATGAGGGTCCCGGTCAAGAAATGAGGTTGGTTGCATTGCAGTTGTCCACGGACCACAGCACAAGCATTGAAGAGGAAGTCATAAGAATTAAGAACGAACATCCTGATGATAGCCAGTGTATTGTCAATGACAGAGTGAAAGGTCGTCTTAAGGTCACCCGAGCATTTGGAGCAGGATTCTTGAAACAGCCAAAGTGGAATGATGTAGTACTGGAAATGTTTCGTAATGAATATATTGGCACTACTCCATATATATCCTGCTTTCCTTCACTATGTCACCATAGATTATGCCAAAGAGATCAGTTCTTGGTCCTCTCATCTGATGGGTTATATCAATATCTAACCAATCAAGAAGTGGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCAGATGGAGATCCTGCCCAACATTTGATAGAGGAGCTGCTCCTCCGTGCAGCCAAGAAAGCTGGAATGGATTTTCATGAGTTGCTGGACATCCCTCAAGGAGATCGGAGGAAGTATCATGACGATGTTACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAATCATCAGGGAAGTATCTCATAAAGGTATACATAGAGGAATCTCTGGTGTTAATGGCAGTAGGCTACCATCTGAAGATTCCATCAAGATTGAGAGAAGCTAAATGCAATTTGATATGA 2436 0.4774 MGGGLSKLFSCFKPVNRTTNQPDQQDVIFAATDPLDETLGHSFCYVRSSARFISPTHSDRFVSPSNSLRFSPTHEPVSRERPDFPETGFKAISGASVSANNSTPKTVLQLDDIYNDATDDNVLGGGVRGSIVNGFESTSSFSALPLQPVPRGGEHSGPVERGAFFLSGPIERGALSGPLEANATTEDGGGVPFSAPLGGFYVKRKRKKRISRFRKAFHRNLSEKNRPWVVPVLNFVGRKESSSNEEKPEVKSENNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDGPEFLMGHLYRAVYNELRGLFWDIEEGEETIPLAAENAVLGGETESSMGNSREELKDEGEVCGDDSNPLPLDRGSAKRVTFQAEGTESRRRRLWEFLAEEDPEDGLDLSGSDRFAFSVDDALSVSNAGSTVGRRWLLLSKLKLGLSKHKEGRGRKLSPLNFGTEDKEKIDSENRAEEKSFRGSRKRKVGPVDHDLVLRALSRALEVTELAYLDMTDKVLGTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYEPKEVKSTMELRCRGNNGSSIESIVEESLALGESATKLGNEGPGQEMRLVALQLSTDHSTSIEEEVIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDVVLEMFRNEYIGTTPYISCFPSLCHHRLCQRDQFLVLSSDGLYQYLTNQEVVSQVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYLIKVYIEESLVLMAVGYHLKIPSRLREAKCNLI 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0286 811 CDD PP2Cc 483 767 IPR001932 -
Glsi09g0286 811 ProSiteProfiles PPM-type phosphatase domain profile. 250 767 IPR001932 -
Glsi09g0286 811 MobiDBLite consensus disorder prediction 442 475 - -
Glsi09g0286 811 PANTHER PROTEIN PHOSPHATASE 2C 243 766 IPR015655 GO:0004722|GO:0006470
Glsi09g0286 811 Gene3D - 234 775 IPR036457 -
Glsi09g0286 811 SUPERFAMILY PP2C-like 262 768 IPR036457 -
Glsi09g0286 811 SMART PP2C_4 247 765 IPR001932 -
Glsi09g0286 811 Pfam Protein phosphatase 2C 600 735 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0286 Glsi-ChrGlsi09 2048067 2053925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0286 1 779 PP2C-type Phosphatase Gene Family AT2G35350 57.824 0.0 825