Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0266 ATGGCTCTCTCTCTGTTGTGTCCTCTCTTTATTACCACCTTGCTTTTCGTGCAAACTCTGGCAGATACTCCATGCTCCGATTGTTTTGTTCATTCTCGGGCATCATATTACCCAAATTCTGAAGAACATGGAACAGACGTAGGTGCATGTGGGTTCGGTTCCTTTGGTGCTACAGTCAATGGCGGAGACGTATCAGCTGCATCCGATCTTTACCGAGATGGTGTGGGCTGTGGTGCCTGTTACCAGGTGAAGTGTACCAACAGTGCCTATTGCTCAGACAACGGTGTGACCGTAGTTATAACCGACCAAGGCTCAAGTGACCACACTGACTTCATTCTTAGCAAACGAGCCTTCGCTCAGATGGCTCAAACAAGTGATGCAGCTGGTTATCTACTGGCCCATGGCATAGTTGATATTGAATACAGACGAGTTTCATGCAGCTACCCATACAAAAATATCACATTCAAGATAGACGAGAGCAGCGGCAACCCTCATTACTTAGCTTTTGTCATATGGTATCAACAAGGAAGGAGAGATATAACTGCTGTGCAGCTCTGTGAGACTCAGAACTTTGTTTGCAAGTTATTGGATCGAAGCCATGGGGCAGTCTGGACCACAAACTCACCACCGAGTGGACCCTTGTTAGTAAGAATGTTGTTTAGTGATGATGATGGAGAAGACACATGGGTTGTTCCTGTTAATAACATACCCCAAGACTGGAAGGCTGGAGAAACATATGACTCAGGAGTGCAAGTGAACCGATAG 765 0.4614 MALSLLCPLFITTLLFVQTLADTPCSDCFVHSRASYYPNSEEHGTDVGACGFGSFGATVNGGDVSAASDLYRDGVGCGACYQVKCTNSAYCSDNGVTVVITDQGSSDHTDFILSKRAFAQMAQTSDAAGYLLAHGIVDIEYRRVSCSYPYKNITFKIDESSGNPHYLAFVIWYQQGRRDITAVQLCETQNFVCKLLDRSHGAVWTTNSPPSGPLLVRMLFSDDDGEDTWVVPVNNIPQDWKAGETYDSGVQVNR 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0266 254 PRINTS Expansin/Lol pI family signature 234 248 IPR007118 GO:0005576
Glsi09g0266 254 PRINTS Expansin/Lol pI family signature 46 64 IPR007118 GO:0005576
Glsi09g0266 254 PRINTS Expansin/Lol pI family signature 134 150 IPR007118 GO:0005576
Glsi09g0266 254 PRINTS Expansin/Lol pI family signature 193 207 IPR007118 GO:0005576
Glsi09g0266 254 SUPERFAMILY PHL pollen allergen 151 248 IPR036749 -
Glsi09g0266 254 Pfam Lytic transglycolase 68 141 IPR009009 -
Glsi09g0266 254 SUPERFAMILY Barwin-like endoglucanases 16 149 IPR036908 -
Glsi09g0266 254 Gene3D - 150 252 IPR036749 -
Glsi09g0266 254 PANTHER EXPANSIN-B3 15 251 - -
Glsi09g0266 254 CDD DPBB_EXLB_N 30 146 - -
Glsi09g0266 254 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 151 IPR007112 -
Glsi09g0266 254 Gene3D - 21 147 IPR036908 -
Glsi09g0266 254 Pfam Expansin C-terminal domain 153 232 IPR007117 -
Glsi09g0266 254 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 165 248 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0266 Glsi-ChrGlsi09 1917046 1918663 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0266 11 250 Expansin Gene Family AT4G17030 42.623 6.03e-61 191