Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0258 ATGGCCATGCTACGGCAAGCTTCACGCCTCTGGACTCGGCCACTGATCACCACACTAAGGATTCGACATTTCTGTACGGAACTCCCAGCCACTCCTTCCTCGGACTCTGCTTTCGTCGAATCATGGAAGAAAGCCATTCCCAACATGGACCCTCCCAAGACTCCATCCGGTTTCATGCACCCTCGTCCTCCCACTCCTCCTTCAATTCCCGCCAAGGTCACCGTCAATTTTGTTCTGCCCTACGCATCTGAGCTTTCTACTAAGGAGGTTGACATGATCATCATACCAGCAACTAGTGGACAAATGGGTGTTTTGGCTGGCCATGTACCCACAATTGCAGAACTGATGCCAGGGATCTTGTCCGTGCATGAAGGAAATGATGTTTCCAAATATTTTGTTAGTGGTGGATTTGCTTTTATCCATGCGAACTCTGTTGCGGATGTAATTGCTGTTGAGGCCGTTCCAGTTGATCGCATTGACCAAAGCCTAGTCCAGAAAGGGCTTTCTGAGTTCAACCAGAAGCTATCCTCTGCTACGACTGAGTTGGAGAAAGCTGAAGCACAGATTGGCTTAGATGTCCACAGTGCTCTTAATTCTGCGCTCACTGGCTGA 612 0.4935 MAMLRQASRLWTRPLITTLRIRHFCTELPATPSSDSAFVESWKKAIPNMDPPKTPSGFMHPRPPTPPSIPAKVTVNFVLPYASELSTKEVDMIIIPATSGQMGVLAGHVPTIAELMPGILSVHEGNDVSKYFVSGGFAFIHANSVADVIAVEAVPVDRIDQSLVQKGLSEFNQKLSSATTELEKAEAQIGLDVHSALNSALTG 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0258 203 Gene3D - 65 159 IPR036771 -
Glsi09g0258 203 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 73 154 IPR036771 -
Glsi09g0258 203 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 35 203 IPR001469 GO:0015986|GO:0045261|GO:0046933
Glsi09g0258 203 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 74 145 IPR020546 GO:0015986
Glsi09g0258 203 CDD F1-ATPase_delta 74 196 IPR001469 GO:0015986|GO:0045261|GO:0046933
Glsi09g0258 203 Coils Coil 168 188 - -
Glsi09g0258 203 Gene3D - 160 202 - -
Glsi09g0258 203 Hamap ATP synthase epsilon chain [atpC]. 71 191 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0258 Glsi-ChrGlsi09 1849799 1851367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0258 3 203 Primary Pumps ATPases AT5G47030 70.244 8.37e-104 296