Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0244 ATGGTCCGCGTGTCAGGTACGTATTCGAGTACTAGTTCTAATGTCGGGCTCAGTGTCATTCCGTTAGTTAGCGACACTTAGGAGCTTGTGAAAGCCGGTTTTGCTTTTCGGAGGGTCGACATGGAGGAGCGATACGAGGCATTGAAGGACCTTGGTTCAGGGAATTTCGGAGTGGCCAGGCTGGTGAGAGATAAGAAGACAAAGGAGCTTGTTGCAGTCAAATACATTGAAAGGGGTAAAAAGATTGACGAGAATGTTCAAAGGGAGATCATTAACCACCGATCTTTAATGCATCCGAACATTATCAAGTTCAAAGAGGTGTTGCTGACCCCAACCCATTTAGCCATTGTCATGGAGTATGCTGCAGGTGGTGAACTCTTCGAGAGGATATGCAGCGCTGGTCGATTTAGTGAAGATGAGGCAAGATTTTTCTTCCAGCAACTAATATCTGGAGTTTGCTACTGTCATTCAATGCAAATTTGTCATAGAGATCTGAAGTTGGAGAACACTCTCTTGGATGGAAGTCCAACACCTCGACTTAAAATTTGTGACTTTGGTTACTCGAAGTCTGCTTTACTTCACTCGCAACCCAAGTCAGCAGTTGGAACTCCTGCCTACATTGCTCCAGAGGTTTTGTCACGAAAGGAATATGATGGAAAGATAGCAGACGTTTGGTCGTGTGGGGTGACTCTTTATGTCATGTTAGTTGGAGCATACCCATTTGAAGATCCTGCAGATCCTAGAAATTTCCGAAAGACAATTGGGAGAATAATGAGTGTTCTATACTCCATACCCGACTATGTGCGCGTTTCTGCAGACTGCAGGCATCTTCTTTCTCGCATCTTTGTTGCCAATCCTGCCAAGAGGATCAGCATCCCGGAGATAAAACAGCACCCTTGGTTTTTGAAGAACTTGCCTCAGGAGATAACAGTATCTGAGAAAAAAGGTAATGAGGAAGCACAAAAAGACCAACCGAGCCAGAGTGTGGAAGAAATCATGCGGATCATACAAGAGGCAAGGACGTCAGGGCAAGGATCCAAAGCTGGTGGGCAAGTTGGCGCAGGGTCATTGGATGTTGAGGCAGACGAGGAATCTGAAGTTGATGTTAGTGTTGACCATGCTGAACCTGTGTGA 1134 0.4568 MVRVSGTYSSTSSNVGLSVIPLVSDTXELVKAGFAFRRVDMEERYEALKDLGSGNFGVARLVRDKKTKELVAVKYIERGKKIDENVQREIINHRSLMHPNIIKFKEVLLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARFFFQQLISGVCYCHSMQICHRDLKLENTLLDGSPTPRLKICDFGYSKSALLHSQPKSAVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPADPRNFRKTIGRIMSVLYSIPDYVRVSADCRHLLSRIFVANPAKRISIPEIKQHPWFLKNLPQEITVSEKKGNEEAQKDQPSQSVEEIMRIIQEARTSGQGSKAGGQVGAGSLDVEADEESEVDVSVDHAEPV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0244 377 ProSiteProfiles Protein kinase domain profile. 45 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0244 377 Pfam Protein kinase domain 45 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0244 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Glsi09g0244 377 CDD STKc_SnRK2 44 300 - -
Glsi09g0244 377 SMART serkin_6 45 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0244 377 PANTHER SERINE/THREONINE KINASE 43 331 - -
Glsi09g0244 377 FunFam Serine/threonine-protein kinase SRK2E 41 120 - -
Glsi09g0244 377 Gene3D Phosphorylase Kinase; domain 1 25 120 - -
Glsi09g0244 377 FunFam Serine/threonine-protein kinase SRK2E 121 309 - -
Glsi09g0244 377 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Glsi09g0244 377 Gene3D Transferase(Phosphotransferase) domain 1 121 309 - -
Glsi09g0244 377 MobiDBLite consensus disorder prediction 312 377 - -
Glsi09g0244 377 SUPERFAMILY Protein kinase-like (PK-like) 38 309 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0244 Glsi-ChrGlsi09 1757290 1760769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0244 44 313 CBL-interacting serine-threonine protein kinases AT5G25110 42.756 5.82e-66 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Glsi09g0244 Pkinase 1.2e-70 CL0016