Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0242 ATGTCCAGCTCGTCGGAGCAGTCGGAATTTTCAGACCAGAAGCCGGCCAAGTTGCCGGAGCAGTCGACTTTCTCTCAGACTTGTAGTCTATTGAGTCAGTACCTCAAGGAAAAAGGCAGCTTCGGAGATCTTACCCTCGGGATGACGTGCAAAGTAGAAGGAAGTGGGTCGCCTGAGACATCTTGTCAGTCTGCAGCAACCATGAGCCTATTTCCAATCAAAGAGAGCAACCTGACAACTATGAGTATACTCTCTCAACAACTTACTTATCGTCCCCATCTCCCTACCGAAGAGATTCCAGACTTGGCAAACTCCAGTGCAATTCAGTCTGTGACTAAGGAGCCTAAAGCTGCACAGTTGACAATCTTTTATGCTGGGCAAGTTCTTGTTTTCGATGATTTTCCGGCTGACAAAGCCAAGGAGATCATGTCCTTTGCCAGCAAAGGAATCTCCCAAAGCCAGAACAGATCTGCTTATACTTTCCCTCTGAGCCAGCCGTCTTTTCCTCCTAATTTGCTCACAAGTTCTGCTGATTCCAGTGGTCCAGTTCATCCTAATGTGAATATCAATCCTAATACTGGCAACAATTTGGTTCAAGAGCACCCTCAAGCACCACCCAGACCTGTTATTTGTGATCTACCAATTGCTAGGAAAGCTTCACTTCATCGGTTCTTGGAGAAGAGAAAGGATAGAATTGCTGCCAGAGCACCGTATCAAACAAGCAGTCCCATGGAGGCCCCTAGTAAGCCAGCTGAATCTATGCCATGGATTGGGTTGTCTGCTAAATCACCACAAATCTGA 801 0.4682 MSSSSEQSEFSDQKPAKLPEQSTFSQTCSLLSQYLKEKGSFGDLTLGMTCKVEGSGSPETSCQSAATMSLFPIKESNLTTMSILSQQLTYRPHLPTEEIPDLANSSAIQSVTKEPKAAQLTIFYAGQVLVFDDFPADKAKEIMSFASKGISQSQNRSAYTFPLSQPSFPPNLLTSSADSSGPVHPNVNINPNTGNNLVQEHPQAPPRPVICDLPIARKASLHRFLEKRKDRIAARAPYQTSSPMEAPSKPAESMPWIGLSAKSPQI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0242 266 SMART tify_2 113 148 IPR010399 -
Glsi09g0242 266 MobiDBLite consensus disorder prediction 236 266 - -
Glsi09g0242 266 MobiDBLite consensus disorder prediction 1 22 - -
Glsi09g0242 266 ProSiteProfiles Tify domain profile. 113 148 IPR010399 -
Glsi09g0242 266 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 250 IPR040390 -
Glsi09g0242 266 Pfam tify domain 114 147 IPR010399 -
Glsi09g0242 266 Pfam Jas motif 214 239 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0242 Glsi-ChrGlsi09 1748898 1751045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0242 1 262 Tify Gene Family AT1G19180 43.116 4.58e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Glsi09g0242 tify 7.3e-19 No_clan