Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0236 ATGGGAACTCTTATCACCGGCCCAGTACTCCGTGCGTCCAACACCTTCGAGTCACAAATGGCATGGCACCTTGCCGCTCTTCTTTTATCGGTTGGTCGCCCAGCACGCTCCGCTGACCTGGCCTCCCGATGCACTTTGTTCAGTGCTTCTCCCGAGCTAGTTGAGTTCCTCTGTTCGATCCCCAAATCCCCCATCTTCTTGACCACCGATCTCTATGTCACTCTCTCTGCGGTGGCTCTAGTCGCTGTTGGACGCTTCATCTCCGGAACCGATTTGATTACTTCTTCTGTCCTGCCTAGAGTTTGCTCAACAGCCAGTTGGTGGAATGATTTCGATTTTTTGAAGGTGTGCTTCAGGAAGCGGAAGCGAAGATTCTTTTCAGATTGCGATTTTCTCCCCGTCGCGAAAAGGATAGTTAATTCTTATCCTATAAATGGTAACCGGTTCTTCCCTTTTCGGTTTCATCTAATTCTTTCCTCCTTCACGTGTGTGTTGATTAATTTGGTTGGTAATTCGAATTACGATGCTGTAGATGAGCCGGATCGAGTGACTTTGCTTTCTCCAAAGGGAATCTGCAATGGTTCTTCAAGGATTATGTTTAAATCAGATGACAGTATAATCAGGAGCGTGGTTACGCAGCCACTAAAAAGGTCATTACTTTCATCCTCAGTTTTTGTCAAATCCCATGGCACACATTTAACTGTTGAAATGGAAAAGGTTGATGATTTAAATGCTGAAATTGATACAAAGGAGTTAGAGTCACCAGGGCAGTTAAATGAGAAAATAAAAGAAATAGAACCCGAGTCAGATGTAGAGCTGGTTTCTCCCTCTAGCATATTGGAAAATCCAGCTCAATGCAAGGAAGCTAAAATAAACGAGAATTTTAGAAGGAGGACAAATGTCAATGACACGCTTAAAGTTTTTAAACGGCGAAGTATATCACCGTTGGCAGGTGACAAAGTCAACGGCAGCAGTGTGGTTGTGAACACTGGAATAAGTGACAGCGAAAGAATTTTGGAACGTAAGAAGACACCATGGTTAATGAGTTCTCGTAGAGTGAAATCTGTTCAAATAATGGTACAGCCATCAAATACTACTGTTTTAGATATCCGGCCTAAAGGTGACATTAGAAGGATCCATAACGAAAAGTGCAATCAAGTTAACCATTTCAAAGGAAAGAAAATGGTTGCAGATGTGAGGAATATGGACTCCTTTTCCAAGCTGAATACCATGCACAGTGATGCAAGTGCTCCTCATCTGCAAGATCTCTGTAAGACTTTACATAATTATAAGAACGTTGATTCTCATGAAGGGAAACAGCACTCTCATGGAGATCAAACATCATTCAGTAAGGTACAGAAAAATAATTCCTCTGGCATGCATATCAAGGAAAGACAGGCAACTTCACTCTCGATGTGCCCTGAGGGTCAAAAGGAGCTTAAAGAGTTTCCAACATTTGAATCGTACACTGTAGAGGAGGAAGAGGGCTCAGGCCCTCGGGCTAGAGCTCATGGGCAACATGTTACCAATGAGCTAAAAGTGCTGGAGCGATTTGGAGGCAAAGACTTTATAATTAAATATGAAGGCAGCTTCAAGAATGGAGATATTGATTGCCTTGTTCTAGAGCATATTGATCATGACAGACCTGAGGTGTTAAGGAAAGAAATCAATATTGCTCAAATCCGATGGTATGGCTATTGCATGTTCAGGGCTCTTGCAAGTCTTCATAAGCGGGATCTGCATCAGAAGCATAGAAATAGCAGTTGTAATTCAATTACTGATCATGTCAGTCTTTCTGTTGAAAAATTCACAGCTTCAACCAAATGTAGAAATTTACCAAAAGTCAATTCTTTGGAAGCAGTCGATCAGCGGACAACAAAAGGCTCCATGTCAATTTTAGATCCTAAGGACATCAAGAAGATGACAATGGGCCAATCAAGCACTAAAAATGACAGGGGTAGTGGGAAGGAAATGAGAAGTCAAGGTGCAGATGGCTCCGGAGTAACTTCGGCAAAGGATGTGACTAGCGCAAGAACATCACTGGCAGAGAAACTGAGGAGAACTTTGCCAGGCCAGGGTAGGAAAGAGCTCATCAACTTACTGCAAGAAGCACTGTTAGGTCCTAATCAAGAATCATCGAGCATTCCGGCTCCTATGAGAAAGCGAATTCCTGCCCCTCGTGGGAAGGTGGAAAACGCGCTTGTATACATCACTCCCATGCCTTTGCACTCAACTGGCATTGATGTCACGGGTGCAGGATTTCCGAAGAGCAAAGGGACAGGAAAATATATGAGAGAAGGTTCTTGTGTGGGAACGAAAGGCTTTCGGGCTCCAGAGGTCTTGTTCAAGTCTCCACATCAAGGTCCTAAGCTTGACATCTGGTCTGCTGGTGTATCCTTACTCTACCTCATAATTGGAAGAACACCTTTTACTGGTGATCCTGAGCAGAACATAAAGGATATAGCTAAACTGAGAGGCAGTGAAGATCTGTGGGAGGTCGCTAAGCTACACGACCGCGAATCCTCATTCCCAATGGACCTATATGATAAACAAACTTTACTATCTATTGGACTTCGAGATTGGTGCTTAATGAACACCAAGAGACCAGAGTTCCTTGAAGTAATTCCCGGTTCACTTTTTGATCTTTTGGATAAGTGCTTGACGGTGAACCCTAGACTAAGAATCAGTGCAGAGGAGGCTCTCAAGCACGAGTTCTTTGCTCCATTCCATGGAAGACAGAGGAAGCAAAGCCTTTGTAGGCAGGCATTCAACTTGGACTCTTGA 2784 0.4361 MGTLITGPVLRASNTFESQMAWHLAALLLSVGRPARSADLASRCTLFSASPELVEFLCSIPKSPIFLTTDLYVTLSAVALVAVGRFISGTDLITSSVLPRVCSTASWWNDFDFLKVCFRKRKRRFFSDCDFLPVAKRIVNSYPINGNRFFPFRFHLILSSFTCVLINLVGNSNYDAVDEPDRVTLLSPKGICNGSSRIMFKSDDSIIRSVVTQPLKRSLLSSSVFVKSHGTHLTVEMEKVDDLNAEIDTKELESPGQLNEKIKEIEPESDVELVSPSSILENPAQCKEAKINENFRRRTNVNDTLKVFKRRSISPLAGDKVNGSSVVVNTGISDSERILERKKTPWLMSSRRVKSVQIMVQPSNTTVLDIRPKGDIRRIHNEKCNQVNHFKGKKMVADVRNMDSFSKLNTMHSDASAPHLQDLCKTLHNYKNVDSHEGKQHSHGDQTSFSKVQKNNSSGMHIKERQATSLSMCPEGQKELKEFPTFESYTVEEEEGSGPRARAHGQHVTNELKVLERFGGKDFIIKYEGSFKNGDIDCLVLEHIDHDRPEVLRKEINIAQIRWYGYCMFRALASLHKRDLHQKHRNSSCNSITDHVSLSVEKFTASTKCRNLPKVNSLEAVDQRTTKGSMSILDPKDIKKMTMGQSSTKNDRGSGKEMRSQGADGSGVTSAKDVTSARTSLAEKLRRTLPGQGRKELINLLQEALLGPNQESSSIPAPMRKRIPAPRGKVENALVYITPMPLHSTGIDVTGAGFPKSKGTGKYMREGSCVGTKGFRAPEVLFKSPHQGPKLDIWSAGVSLLYLIIGRTPFTGDPEQNIKDIAKLRGSEDLWEVAKLHDRESSFPMDLYDKQTLLSIGLRDWCLMNTKRPEFLEVIPGSLFDLLDKCLTVNPRLRISAEEALKHEFFAPFHGRQRKQSLCRQAFNLDS 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0236 927 ProSiteProfiles Protein kinase domain profile. 447 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0236 927 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 415 908 - -
Glsi09g0236 927 SMART serkin_6 489 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0236 927 MobiDBLite consensus disorder prediction 640 676 - -
Glsi09g0236 927 Pfam Protein kinase domain 768 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0236 927 Gene3D Transferase(Phosphotransferase) domain 1 742 925 - -
Glsi09g0236 927 FunFam Kinase like protein 749 917 - -
Glsi09g0236 927 SUPERFAMILY Protein kinase-like (PK-like) 505 580 IPR011009 -
Glsi09g0236 927 SUPERFAMILY Protein kinase-like (PK-like) 766 912 IPR011009 -
Glsi09g0236 927 Coils Coil 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0236 Glsi-ChrGlsi09 1711899 1717753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0236 753 926 MAP Kinase Gene Family AT2G46070 28.090 9.83e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Glsi09g0236 Pkinase 2e-17 CL0016