Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0226 ATGTTCATGGCGTCCTCCTCCTCCTCCTTCATGCACCCACTTGTTAAAATAAGGGAAGACAATATGTGCCGTCACAATTCTCCTGTACATCATTCTGCTGAAGAAGAAATTGCAGCTGACGAGAGTCTTCTAATTTATTGCAAACCTGTTGAACTGTACAACATTCTCAATCGCCGTGCTCTTCATAATCCTTCATTTCTTCGGAGATGTTTGCACTACAAAATACGAGCAAGGCATAAAAGGACTTTGAGAGCTGGAATTGTTATTTTCAATTATAGGGACTGTTACAGCATGCTTCGAAAGACTGAAGTGACTGAGGAATTTTCTTGTCCATTTTGCTTGATGCAATGTGCAAACTTTAAGGGTTTGCGATTTCATCTTTGTTCATCACATGATCTATTCAACTTTGAGTTTTGGGTAACTGAAGATTATCAAGCAGTGAATGTCTCTGTAAAGATTGATATATTGAGATCAGAGAATGTCACTGATGGAATAAATCCACAATCACAAACCTTCTACTTCTGTGCAAGGCCTCGACGACGTATACAGAAGGACTCCATTCAAAATAAAAAGCGTGCTAGTGTACAGTTCCTGGAGCCATTGGACTCACCCATGTTGGCTACAGAAGGCATACAGAATGGTTTTCTTGAGAAGCATGATGATACTGTGTCCTGCAAAGGTGTGAACATGTCCAATACATCTCCCAGTCAGAAGGATTTGCAGAATGGAAAACATGATCAAGGAAAATTTGGTCCTCATTATCCTGGTGCTATGGATTACTTGGAACATGTTGCATCCAGTTTCAACATTCCAGGTGTTCCAATTGCCATGCCCCAATCTTCTAGGGACCCTGAATGTAATAAATCAGTATCTAGATGTGATCCTGCTTTGCCTGCTAAGACAAGGAAGTTGAACATGGATCGATCAGACTCGAGAAACCGTATGCTACTGCAGAAAAGACAGTTCTTTCACTCTCACAGAGTTCAGCCTATGGCACTAGAACAAGTGTTATCAGATCGGGATAGTGAAGATGAAGTTGATGATGACATTGCAGATCTTGAAGATCGAAGGATGCTTGATGATTTTGTGGATGTATCCAAAGACGAAAAGCAGCTCATGCATCTCTGGAACTCTTTTGTGAGGAAGCAAAGAGTGCTAGCGGATGGTCATGTTCCCTGGGCTTGTGAGGCTTTTTCCAAGCTTCATGGAAAGGAGCTTATCTCATCTCCCACTTTATTTTGGTGTTGGAGGTTATTCATGATCAAACTTTGGAATCACGGCCTTCTTGATGCCAGCACGATGAACAACTGTAGCATAATATTAGATAGTTTCAGAAACGAGGGATTTGCTGCTGGCAAAAATTGA 1365 0.4132 MFMASSSSSFMHPLVKIREDNMCRHNSPVHHSAEEEIAADESLLIYCKPVELYNILNRRALHNPSFLRRCLHYKIRARHKRTLRAGIVIFNYRDCYSMLRKTEVTEEFSCPFCLMQCANFKGLRFHLCSSHDLFNFEFWVTEDYQAVNVSVKIDILRSENVTDGINPQSQTFYFCARPRRRIQKDSIQNKKRASVQFLEPLDSPMLATEGIQNGFLEKHDDTVSCKGVNMSNTSPSQKDLQNGKHDQGKFGPHYPGAMDYLEHVASSFNIPGVPIAMPQSSRDPECNKSVSRCDPALPAKTRKLNMDRSDSRNRMLLQKRQFFHSHRVQPMALEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELISSPTLFWCWRLFMIKLWNHGLLDASTMNNCSIILDSFRNEGFAAGKN 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0226 454 PANTHER POLYCOMB GROUP PROTEIN 22 81 - -
Glsi09g0226 454 Pfam VEFS-Box of polycomb protein 304 439 IPR019135 -
Glsi09g0226 454 MobiDBLite consensus disorder prediction 229 250 - -
Glsi09g0226 454 CDD ZnB-Zn_EMF2-like 34 155 - -
Glsi09g0226 454 CDD VEFS-box_EMF2-like 317 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0226 Glsi-ChrGlsi09 1667924 1678158 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0226 20 89 C2H2 Transcription Factor Family AT5G51230 58.571 1.59e-14 73.9