Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0225 ATGGCCTACACATTTAGGCAACGAAAGCAAAACACTAGCTATGCAGATTCAAACAGTCCAGAAAGCAACTCAAGCAGTTCTGATCCAGATTATTCAAGGTCCAGCTCTAAGAGACCAACAACAAGAAGGAACTTGTCATCATGCACTCCGACAGCAATAGAGACTAAAATGATGGACTCAAGTGTGAATTTGAGAGCAATGCGTCGACGGGGTCGACCTTCTAAGAAGAGGGTAGATGGAGTCCAAAACAAGGAAAACAGTGATGCTAGACAAAGTTCAAGCAGGAAAAGAGGGTCATTTTCAGCTGAAGAACCAACTTCAATCTTGGACAAAGATTCATCTTCATCTGTAGTGTTTAGTTCAAGCAGAAAAACCATTTTGTCATGGTTGTTAGATTGCAAGATTGTCAAGGAGGATGAACAAGTAGGCTATATGGATGGAACAAAGGAAACTGCAACTAAGACAGGAAGAATTACGAGAGGTGGAATTCTCTGCAGCTGTTGCCAGAGGGAATTTTCCGTGTGGTCCTTTGAGAAACATGCTGGTAGTGATCTCAAACAACCCTATGAACATATTTACCTCCTCAAAAAAGGCACATGTCTCCTGGAGTGCCAGATAGTTGCTTGGCATGAGCCCAGGGAACAAAAACGTCGGGAAATAAATTCCTTTGTACCAAAACAAACAGCCACAGACAAAAGTGATGATGCTTGTCCAATCTGTGGAGATGGAGGAGACTTGATCTGCTGTGACAAGTGCCCCTCCACATTCCATCCAAACTGTATGAATATGGAGGAATTTGAGAAAGAAGCTCTTAAAGATACCCTAGACCTTGACTGTTCGAGGTTGTATTGTGGGCGAAGTTGTAGAGAGACATATGAGAAATTGGAGAGTTTGGTTGGAGTCAGAAATGAGCTCGATGAAAGCTACTCTTGGAGAGTTATTCGCCAAATGGATAGGATGCCACCTGCTGATAGGCACCAACACTTTGAAAATAATTCAAAGCCTATCACTGCTGCTTTCATCAACATATCAAACTTAACCAGGATTAATTTTAGCCGTTTTTATACATTTATACTGGAGAAAGATGATGAGGTCATCTGTGCAGCTTCTATAAGAATCCATGGGCGGAGGGTGGCAGAGATGCCCTTTATTGCCACAGAAGAGACATGCAGGGGCAAAGGAATCTGTGGGATGCTATTGACCTTGGTTGAATCGACCCTGAGCAATCTCAAAGTCGAAACCTTGATCATACCATCCATTGTGGAGACCTCCGGGATGTGGATGTTCAAGTACGGATTCAATGATCTAAGTAGAGAGTTGAAAAGAGAAATCACCTCCTATAACATTTTAATGTTTCCTCTTTCTTCAAGACTGCACAAGGACTTAACCATACAGACAGCAGAATCATATGGTGGCGAGGACAATAAGGATAAACAAACTGACAATCAGAATGCCCAGAAAGCACAAAAGGATGGTGTAGAGAGATCACTTATAGACCTGAACATGGACCCTCCTGATGAAGATTAG 1527 0.4244 MAYTFRQRKQNTSYADSNSPESNSSSSDPDYSRSSSKRPTTRRNLSSCTPTAIETKMMDSSVNLRAMRRRGRPSKKRVDGVQNKENSDARQSSSRKRGSFSAEEPTSILDKDSSSSVVFSSSRKTILSWLLDCKIVKEDEQVGYMDGTKETATKTGRITRGGILCSCCQREFSVWSFEKHAGSDLKQPYEHIYLLKKGTCLLECQIVAWHEPREQKRREINSFVPKQTATDKSDDACPICGDGGDLICCDKCPSTFHPNCMNMEEFEKEALKDTLDLDCSRLYCGRSCRETYEKLESLVGVRNELDESYSWRVIRQMDRMPPADRHQHFENNSKPITAAFINISNLTRINFSRFYTFILEKDDEVICAASIRIHGRRVAEMPFIATEETCRGKGICGMLLTLVESTLSNLKVETLIIPSIVETSGMWMFKYGFNDLSRELKREITSYNILMFPLSSRLHKDLTIQTAESYGGEDNKDKQTDNQNAQKAQKDGVERSLIDLNMDPPDED 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0225 508 MobiDBLite consensus disorder prediction 93 114 - -
Glsi09g0225 508 Gene3D - 314 425 - -
Glsi09g0225 508 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 312 459 IPR000182 GO:0016747
Glsi09g0225 508 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 224 313 IPR013083 -
Glsi09g0225 508 PANTHER PHD FINGER PROTEIN 12 279 334 IPR042163 GO:0003714|GO:0045892
Glsi09g0225 508 SMART PHD_3 236 289 IPR001965 -
Glsi09g0225 508 CDD NAT_SF 357 417 - -
Glsi09g0225 508 MobiDBLite consensus disorder prediction 469 508 - -
Glsi09g0225 508 MobiDBLite consensus disorder prediction 1 58 - -
Glsi09g0225 508 MobiDBLite consensus disorder prediction 1 114 - -
Glsi09g0225 508 MobiDBLite consensus disorder prediction 76 92 - -
Glsi09g0225 508 SUPERFAMILY FYVE/PHD zinc finger 230 266 IPR011011 -
Glsi09g0225 508 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 352 422 IPR016181 -
Glsi09g0225 508 Pfam Tify domain binding domain 156 206 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0225 Glsi-ChrGlsi09 1663649 1666772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0225 92 462 PHD Transcription Factor Family AT4G14920 35.189 3.51e-78 263