Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0197 ATGAGGTCGGACCCAACCCTTCTTATTTTGGGGCAAAATTTGCCATCCCTCCCGCGGATAAATGTTTGGTTTTGCCGTATTGACCGTAATCGTCCGCCAGACCCCAACTCAGTGACGCAAGACAAAAACCTCTTAAACCCCTTTCCATCAGTTGATGACTTGAATGTCGATGTCATTCTCTGTAAAACCCTAACTAGTTTCGTTCCAGTAGTAGGCAACACCATGGAGGAACTCAACGAAGGACCACCCAATAGAGAACTCTACGCACTCTTACACTTATCGCCGGAAGCTTCCGACGAAGACATCCGAAGAGCTTATCGGCAATGGGCACAAGTCTATCACCCTGATAAATACCAAGCTCCACACATGAAAGATATTGCTACTGAAAACTTTCAGCGCATTTGTCAAGCGTATGAAGTTTTGTCAGATCCAAATAAAAGGCAAATATATGATATATATGGCATGGAGGGTTTGACCTCTGGATTGGAAATTGGTTCAAAGCTGAACAAAGCAGAAGAGATAAAGGCTGAACTGGAGAGACTACGCCGAATGAAGGAGCAAGAAAAGATATCAGCACATTTTAGAACTTCCGGTACAATTCTGGCCAATATGTCTTTGCCACACTGTCTAAATGGTGATGGCATCTTGAGAGGAATGGCTATGACAAGTGAAGTTCAGTCTCAGTTATCAAAACGTAATACTGTGGCATTTGGTGGCAATTTAGCAGTTGATGGAAATGCAGGTGGTGGGGGTGCTACTGGTTTGTTTAGGCATCAAATTTCAGAAGTTTCTTCAGTAGAGTTTATGGCTTCGGCTGGTTTGCGTGCACTGATTGGAGTGCAAACATCTCGTCAATTATCAGTACACTCAGCTGCAACAATGGGCCTTGCTATGTCGTTGCAAGATGGTTCATTGAATCTGTCTAATTCGTGGACCCGCCAACTGTCAGAAACAGCCAATGGACATATACAGCTTGCTTTGGGACCTCAATCATCTATAGCTGTAGGGTGGCAAAAGAAAGATGAGAGAAGGTCTGCCTCTGGAGAAGTGAAGTTTGGCACAAGTTCTTTTGATGTAGCAGCTCATTATACTCATCGTTTTTCTTCTAAATCTCATGGCCGCATTTCGGGCAGAGTTGGAAGTTCTGCCCTTGAGATTGAAATTGGTGGTGGGAGGAAGTTATCCAAATTCAGCACTGTCCGCTGGTTGTATTCAATAGGAATTCAGGGTATTTTTTGGAAACTAGAACTGCATCGCGGGGGCCAAAAGTTAATTATTCCTATTTTGCTGACCAGGCATTTGAACCCTGTCTTTGCTAGTGGAGCATTGGTTATTCCGGCATCTTTTTACTTTCTTCTCAAGAAATTTGTTATCAAACCCTATTACCTTAAAAGAAATAAGCAGAAGGCTCTAGAGAATGCAGAGAAAACTTCTGCTCAGGTTCAAGAAGCGAAGACTACAGCAGAGAAAGCTCAGCAATTACAACAAACTGTGGCTAATAGGAAAAGAAATAAGCAATTAGAAACAGGCGGACTGGTTATTACTAGAGCACTATACGGAAATCATATTGTTTTAAACAAGATAAATGCGTCAAGTGAAACAAGTCATGAATCAACCTCAGAAGTCATAGATGTTACAATACCTCTGAATTTCCTTGTTAGTGATTCTGGCCAACTCAAGCTTCATGAAGGTGTAAAAAAATCAGGCATCATGGGCTTTTGTGATCCATGTCCAGGAGAACCTAAAAAGTTGTATGTAGAGTACACTTACGCTGGCAACCAACATAAGGTCGTGGTTGGTGACTATGAAGATTTATTAATACCCCAGGGCGCACACAGGATCTAA 1845 0.4238 MRSDPTLLILGQNLPSLPRINVWFCRIDRNRPPDPNSVTQDKNLLNPFPSVDDLNVDVILCKTLTSFVPVVGNTMEELNEGPPNRELYALLHLSPEASDEDIRRAYRQWAQVYHPDKYQAPHMKDIATENFQRICQAYEVLSDPNKRQIYDIYGMEGLTSGLEIGSKLNKAEEIKAELERLRRMKEQEKISAHFRTSGTILANMSLPHCLNGDGILRGMAMTSEVQSQLSKRNTVAFGGNLAVDGNAGGGGATGLFRHQISEVSSVEFMASAGLRALIGVQTSRQLSVHSAATMGLAMSLQDGSLNLSNSWTRQLSETANGHIQLALGPQSSIAVGWQKKDERRSASGEVKFGTSSFDVAAHYTHRFSSKSHGRISGRVGSSALEIEIGGGRKLSKFSTVRWLYSIGIQGIFWKLELHRGGQKLIIPILLTRHLNPVFASGALVIPASFYFLLKKFVIKPYYLKRNKQKALENAEKTSAQVQEAKTTAEKAQQLQQTVANRKRNKQLETGGLVITRALYGNHIVLNKINASSETSHESTSEVIDVTIPLNFLVSDSGQLKLHEGVKKSGIMGFCDPCPGEPKKLYVEYTYAGNQHKVVVGDYEDLLIPQGAHRI 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0197 614 SMART dnaj_3 85 146 IPR001623 -
Glsi09g0197 614 SUPERFAMILY Chaperone J-domain 83 157 IPR036869 -
Glsi09g0197 614 Gene3D DnaJ domain 79 176 IPR036869 -
Glsi09g0197 614 PRINTS DnaJ domain signature 146 165 IPR001623 -
Glsi09g0197 614 PRINTS DnaJ domain signature 106 121 IPR001623 -
Glsi09g0197 614 PRINTS DnaJ domain signature 88 106 IPR001623 -
Glsi09g0197 614 PRINTS DnaJ domain signature 126 146 IPR001623 -
Glsi09g0197 614 Pfam DnaJ-like protein C11, C-terminal 460 608 IPR024586 -
Glsi09g0197 614 Pfam DnaJ domain 87 151 IPR001623 -
Glsi09g0197 614 Coils Coil 164 191 - -
Glsi09g0197 614 ProSitePatterns Nt-dnaJ domain signature. 131 150 IPR018253 -
Glsi09g0197 614 PANTHER CHAPERONE PROTEIN DNAJ 13 75 614 IPR042162 -
Glsi09g0197 614 CDD DnaJ 86 143 IPR001623 -
Glsi09g0197 614 ProSiteProfiles dnaJ domain profile. 86 154 IPR001623 -
Glsi09g0197 614 Coils Coil 464 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0197 Glsi-ChrGlsi09 1485559 1497519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0197 88 153 C2H2 Transcription Factor Family AT1G74250 44.118 1.08e-07 53.1