Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0163 ATGTCATCCTCTTCTACTACCTTATCGCTGGACCACCTCCCTCCTTCCGACCAGCTTTGTTATGTCCACTGCAACATTTGTGACACTGTCCTCGCCGTAAGTGTTCCTTGCACAAGCTTGTTCAAGACCGTCACTGTCCGATGCGGCCACTGCACCAACCTCCTGCCAGTCAATATGCGTGGATTGTTTCTGCCATCGGCGAATCATTTTCATTCGGCTCACTCTTTCTTCTCTCCGTCACATAACATTCTGGATGAGATGCCAAATTTTTCGATCAACCAGTCAAACTCATCAAACGATCATCACTTAGCTATGCCTCCTAGGGCTGCAGCTCATGAGCTTCCACGGCCACCCCTCATAAATAGACGTGAGATTTCACCTCTCGACGGTTCCGTTTCTAGTTCATCCCTGATTCTGAATTCTGATGTGTGTGCGCGTGTGCGTCATGTCCAGCCCCTGAGAAGAGACAGAGAGTCCCCTCCGCCTACAACCGCTTCATTAAGTGAGGACGAGATCCAACGCATCAAGTCTGTCAATCCCGACATAACCCACAGACAAGCCTTCAGCGCAGCTGCCAAGAATTGGGCCCACTTCCCTCACATCCACTTTGGTCTCATGCCTGATCAGACTGTGAAGAAGACAAATGTGTGCCAGCAGGAAGGAGAGGACGTTCTCATGAAAGATGGGTTTTTTGCTTCGCCTAATCTTGGTGTTTCTCCCTACTAA 726 0.4972 MSSSSTTLSLDHLPPSDQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLFLPSANHFHSAHSFFSPSHNILDEMPNFSINQSNSSNDHHLAMPPRAAAHELPRPPLINRREISPLDGSVSSSSLILNSDVCARVRHVQPLRRDRESPPPTTASLSEDEIQRIKSVNPDITHRQAFSAAAKNWAHFPHIHFGLMPDQTVKKTNVCQQEGEDVLMKDGFFASPNLGVSPY 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0163 241 PANTHER PROTEIN YABBY 6-RELATED 1 215 IPR006780 GO:0007275
Glsi09g0163 241 Pfam YABBY protein 15 205 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0163 Glsi-ChrGlsi09 1224349 1226610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0163 26 239 C2C2-YABBY Transcription Factor Family AT4G00180 43.668 1.68e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Glsi09g0163 YABBY 6.3e-50 CL0114