Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0152 ATGGCAAGACTTGGGATTTCTTTGCTGCTCCTGAATCTTGCCATTTACATGGCCGTCAGGGCAGAATCCGCCATTCCCAGACGATCCAACCCAACAGATTTCATCAAGTCCTCGTGCAGGGCCACTCGCTACCCTGTTTTATGCGTTCAAAGTCTCTTAGGCTACGCAAGCGTGATTCGCCGAAGCGAGCGACAACTAGCCGTGACTGCTTTATCTGTGAGCATATCTAGGAGTCGATCATGTTCGTCATTTGTGAAGAAGTTGGCCCAGGTAAGGGGAATTAAGTCTAGAGAGTACAGAGTTGTCCAGGACTGCATAGAGAACATGGGTGATAGTGTGGACCGTCTGAGCCAATCGGTTAGGGAGCTCGGACGCACGGGTGGGGACTTTGTGTGGCACATGAGCAACGTGCAGACCTGGGTTAGTGCCGCTCTCACTGACCAAAACACCTGTCTAGATGGGTTGGCTGGACCTCGCATGGATGGAAACGTGAAGGCTTCCATTAGGCGCAGGGTCTTCAAAGTTGCTCAAGTCACTAGTAATGCACTTGCATTGGTTAATCGCTTTGCCAACACGCACTGA 582 0.512 MARLGISLLLLNLAIYMAVRAESAIPRRSNPTDFIKSSCRATRYPVLCVQSLLGYASVIRRSERQLAVTALSVSISRSRSCSSFVKKLAQVRGIKSREYRVVQDCIENMGDSVDRLSQSVRELGRTGGDFVWHMSNVQTWVSAALTDQNTCLDGLAGPRMDGNVKASIRRRVFKVAQVTSNALALVNRFANTH 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0152 193 NCBIfam pectinesterase inhibitor domain 7 187 IPR006501 GO:0004857
Glsi09g0152 193 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 189 IPR035513 -
Glsi09g0152 193 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 185 - -
Glsi09g0152 193 FunFam Pectin methylesterase inhibitor 1 30 189 - -
Glsi09g0152 193 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 190 IPR035513 -
Glsi09g0152 193 SMART PMEI_2 30 185 IPR006501 GO:0004857
Glsi09g0152 193 Pfam Plant invertase/pectin methylesterase inhibitor 33 185 IPR006501 GO:0004857
Glsi09g0152 193 CDD PMEI-like_3 37 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0152 Glsi-ChrGlsi09 1169338 1169919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0152 35 192 Carbohydrate Esterase AT3G14310 29.814 1.28e-20 87.0