Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0146 ATGTTGCCTCAGCTATATTGCATATTGACCCTATCCGATATCTTCAACCTAAACCTACACAATTTTCATAATTATATTGGTAAATTTCATTGGTTTGATGGCCTTAGCAGTGGCTCATCTTCGGTCACTATTCAATTCCTTCTCATATCCATTAAAACTTGTGGTAATGTTCTGAACTTTTTATTCTATAGCAATCTTACTGAGTTTATCACGTGTTTTAAGAGAATGGTTCGAGGAAGAGATGCCTGTTGGGAACATTGTGTCCTTGTTGATGCAACAAGACAGAAGGTTAGGTGTAATTATTGTCAACGGGAGTTCAGTGGAGGAGTATACAGGATGAAGTTTCACTTGGCTCAAATAAAAAACAAAGATATTGTTCCCTGCACTGAAGTTCCAACTGATGTACGGGACCATATTCTAAGTATATTGAGCACTCCAAAGAAACAAAAGACCCCCAAGAAACAAATAGTGGACCAAGTAGCTGCAGCAAATGTTCAACAGAATAGCTCTTCTGCCAGTGGTGGCTTCCATCCTAACCTTGGCTCTAGTGGGCGGAATGGCAGTGCTTGTCCATCTTTATTATTTCCACGTCCTTCACCTACTGCCCAGCCATTAGTGGATGATACTCAAAAGCAAAAGCAGGATAGTGCTGATAAAAAGATTGCCTTATTTTTCTTCCACAACTCCATTCCTTTTAGTGCTGCTAAATCCATGCATTATCAGCAGATGATGGATTCTGTAGCCCAGTGTGGGGCAGGATACGAAGCCCCAAGTTATGAGAAATTGAGGTCTACTCTTCTGGAAAAAGTGAAAGGTGATATTCATGATCAATATACGAAATACAGAGATGAGTGGAAAGAAACAGGATGCACAGTGTTGTGTGATAGCTGGTCTGATGGTAGGGCAAGATCATTAGTAGTACTATCCGTTGCATGCCCAAAAGGGACTCTGTTTTTTAAGTCAGTTGATGTTTCAGGTCATGAAGATGATGCTACATACTTGTTTGAGTTGCTGGAGACTGTCGTGTTGGAGATTGGTATAGAAAATGTTGTTCAGGTTATAACTGATACCACTGCTAGTTATGTTTATGCTGGTAGGCTTCTCATGGCAAAGTATAGTTCATTGTTTTGGTCTCCTTGTGCATCTTATTGTATTGATAAGATGTTAGAGGATATTGGTAGACAAGATTGGGTAGGGACAGTCTTAGAGGAGGCAAAGACCATTACACAATACATTTATAATCATGCGTGGGTTCTGAATATAGTGAGAAAGTTCACTGGTGGAAGAGAATTGATCAGGCCAAGAATTACTAGATTTGTCACTAACTTCCTTTCCTTGAGGTCTATAGTGATACAGGAGGATAATTTAAAGCATATGTTTTCACATTCAGAGTGGTTGTCTTCCATATATAGCAGACGTCCAGATGCGCAAGCCATTAAGTCATTGCTGTATTTAGATAGATTTTGGAAATATGCACATGAAGCTGTTAGTGTTTCTGAACCGCTGATTAAAATCCTAAGGATCGTTGATGGGGACATGCCTGCTATGGGTTATATATATGAAGGAATTGAGAGGGCAAAGGTTGTAATCAAGGCCTATTATAAAGGAATCGAAGAGAAATACATGCCAATCTGGGATATAATTGATAGGAGATGGAATATGCAACTTCATTCATCGCTACATGCTGCAGCTGCATTTCTAAATCCTTCAATCTTCTACAATCCGAACTTCAAGATAGATTTGCGGATGAGGAATGGATTTCAAGAAGTGATGCTCAAGATGGCTACTACAGATAAAGACAAAATGGAAATCACTAAAGAACATCCGTTTTACATCAATGCACAAGGTGCACTTGGGACTGACTTTGCTGTCTTAGGAAGAACGGTGAACGCCCCAGGTGACTGGTGGGCAGGATATGGTTATGAAATCCCCACTCTCCAGAAAGCGGCAATACGGATACTAAGTCAACCTTGTAGTTCCCATTGGTGCAGTTGGAATTGGAGCACTTTCAAGAGTATACATAGCAAGAAACGTAATAGAGTGGAGATGGAGAAATTCAGCGATTTGGTTTTTGTGCATTGCAATCTTTGGTTACAAGCCATTTGCCAACGTAGGGAAGCAAAATGTAGATCCATTATCTATGATGAAATAGATGTTAGTTATGAATGGCCCACTGAAATGGAATCCTCAGCCCCACTTTTGGATGATTCCTGGTTAGACGATTTGCCCCTTGAATGCAAAGGAAATTTGTTAGAGGATTCATTGGCGTTTGATAGGATCCGATTGAGAGCTGAGAGGGTCCAGCCCAGCCATTCACATCGAAGGGAAGGTGCAGTAAAACCCGTAAGTCTATGCATAGGCATATGGGTGGATGGACAGCATTCGTCGAAAGCACGCTTCCTTCTTGTTCCTTTCGCTGCTTCTGAAATCTCAACTTTCTATCAAAATCTGATGGATTTCACTAAAGATACTGTCACAGGCCTGCTTCTTGCTTTCTCGGCCATTTTCGCACTCGCCTGGGTCTACTTCATCAAACCCAATACCAAGCTGCCACCAGGTCCCCCAGGCCTCCCCTTGTTCGGGAATCTTCTATCCCTTGATCCCGAGCTTCACTCCTATTTCGCGGCTTTGTCTCGGACCTATGGCCCGATACTCAGGCTCCGACTTGGGAACAAACTTGGCATCGTCGTCAGCTCCCCTTCCCTGGCTCGTCAAGTGCTCAAAGACCTAGATGTGACTTTTGCTAATCGTGACGTGCCTGCTGCGGCCAGGGCAGCAAGCTACGGCGGATCTGATATAGTTTGGACCCCCTATGGACCCGATTGGCGAATGCTGAGAAAAGTTTGTGTGCTCAAGATGCTTAGCAACAGCACCTTGGATTCTGTCTATGCCCTCCGCCGCAGGGAGGTCCGAAAAACTGTCGGTTATCTATATACTCAGGTGGGGTCTCCGATTGATATCGGGGAGCAAATGTTTCTTACTATACTGAATGTGGTCACCAACATGTTGTGGGGCGCCGGGGGTGAAGAGACCGCTTCTTTGGGAGCCGAGTTCAGGGAAGTGGTGGCCAACATGACTTATCTTTTGGGGAAGCCCAACGTATCGGATTTCTTTCCCTGGTTGGCTCGCTTTGACTTGCAAGGTATAGAGAAACAGATGCTACTGTTGGGCCGGCGGTTCGATAGAATCTTCGAGAAGATGATTGATCATCGCCTCAAGATGAATGATGAGAATGGAAGCCAAGGATCAGACAGTAAGGATTTCTTGCAGTTCTTATTGAATTTGAAGGATGAGGGAGATTCCAAGACGCCTCTCACCATGACCCACCTTAAGGCTCTGCTCATGGATATGGTGGTGGGTGGAAGTGACACATCCTCTAACTCGATTGAGTTTGCGATGGCTGAATTAATGCACAAGCCAGAGGTGATGAAGAGAGTCCAAGAAGAATTGGTGAGTGTAGTGGGAAAAGATAACATGGTAGAAGAGTGTCACATCGAGAAGCTGCCGTACTTGCATGCAGTGATGAAAGAAACTCTCCGGTTGCACCCTGTGCTTCCACTCTTAGTCCCACACTGCCCAAGTGAAACCTGCACAGTGGGAGGGTACACTGTTCCAAAAGGGTCTCGGGTGTTCGTGAACGTGTGGGCTATACATAGAGACCCTTCCAATTGGGAGAAACCTCTGGAATTCGACCCGACAAGGTTCTTGGACGCTAAATGGGATTACAGTGGGAGGGACTTCAAGTATTTCCCATTTGGGTCTGGGCGAAGAATATGTGCAGGAACTGCCATGGCGGAGAGGATGTTTTTGTATTCTGTCGCAACACTAGTGCACTCCTTTGACTGGAAAGTACCCCAAGGCCAAGGGTTGGATCTTTCTGAGAAGTTTAGCATTGTAATGAAAAAGAAAATACCTCTGCTAGCCATCCCCACGCCACGATTATCTAACCCGGCTCTCTATCAATAG 3966 0.441 MLPQLYCILTLSDIFNLNLHNFHNYIGKFHWFDGLSSGSSSVTIQFLLISIKTCGNVLNFLFYSNLTEFITCFKRMVRGRDACWEHCVLVDATRQKVRCNYCQREFSGGVYRMKFHLAQIKNKDIVPCTEVPTDVRDHILSILSTPKKQKTPKKQIVDQVAAANVQQNSSSASGGFHPNLGSSGRNGSACPSLLFPRPSPTAQPLVDDTQKQKQDSADKKIALFFFHNSIPFSAAKSMHYQQMMDSVAQCGAGYEAPSYEKLRSTLLEKVKGDIHDQYTKYRDEWKETGCTVLCDSWSDGRARSLVVLSVACPKGTLFFKSVDVSGHEDDATYLFELLETVVLEIGIENVVQVITDTTASYVYAGRLLMAKYSSLFWSPCASYCIDKMLEDIGRQDWVGTVLEEAKTITQYIYNHAWVLNIVRKFTGGRELIRPRITRFVTNFLSLRSIVIQEDNLKHMFSHSEWLSSIYSRRPDAQAIKSLLYLDRFWKYAHEAVSVSEPLIKILRIVDGDMPAMGYIYEGIERAKVVIKAYYKGIEEKYMPIWDIIDRRWNMQLHSSLHAAAAFLNPSIFYNPNFKIDLRMRNGFQEVMLKMATTDKDKMEITKEHPFYINAQGALGTDFAVLGRTVNAPGDWWAGYGYEIPTLQKAAIRILSQPCSSHWCSWNWSTFKSIHSKKRNRVEMEKFSDLVFVHCNLWLQAICQRREAKCRSIIYDEIDVSYEWPTEMESSAPLLDDSWLDDLPLECKGNLLEDSLAFDRIRLRAERVQPSHSHRREGAVKPVSLCIGIWVDGQHSSKARFLLVPFAASEISTFYQNLMDFTKDTVTGLLLAFSAIFALAWVYFIKPNTKLPPGPPGLPLFGNLLSLDPELHSYFAALSRTYGPILRLRLGNKLGIVVSSPSLARQVLKDLDVTFANRDVPAAARAASYGGSDIVWTPYGPDWRMLRKVCVLKMLSNSTLDSVYALRRREVRKTVGYLYTQVGSPIDIGEQMFLTILNVVTNMLWGAGGEETASLGAEFREVVANMTYLLGKPNVSDFFPWLARFDLQGIEKQMLLLGRRFDRIFEKMIDHRLKMNDENGSQGSDSKDFLQFLLNLKDEGDSKTPLTMTHLKALLMDMVVGGSDTSSNSIEFAMAELMHKPEVMKRVQEELVSVVGKDNMVEECHIEKLPYLHAVMKETLRLHPVLPLLVPHCPSETCTVGGYTVPKGSRVFVNVWAIHRDPSNWEKPLEFDPTRFLDAKWDYSGRDFKYFPFGSGRRICAGTAMAERMFLYSVATLVHSFDWKVPQGQGLDLSEKFSIVMKKKIPLLAIPTPRLSNPALYQ 1321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0146 1321 CDD CYP76-like 878 1310 - -
Glsi09g0146 1321 PRINTS P450 superfamily signature 1250 1259 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g0146 1321 PRINTS P450 superfamily signature 1173 1184 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g0146 1321 PRINTS P450 superfamily signature 1120 1137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g0146 1321 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 1252 1261 IPR017972 GO:0005506|GO:0016705
Glsi09g0146 1321 Pfam Cytochrome P450 851 1303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g0146 1321 Pfam hAT family C-terminal dimerisation region 632 695 IPR008906 GO:0046983
Glsi09g0146 1321 FunFam Cytochrome P450 - like protein 841 1307 - -
Glsi09g0146 1321 Gene3D Cytochrome P450 844 1306 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g0146 1321 PRINTS E-class P450 group I signature 878 897 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g0146 1321 PRINTS E-class P450 group I signature 1172 1190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g0146 1321 PRINTS E-class P450 group I signature 1213 1237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g0146 1321 PRINTS E-class P450 group I signature 902 923 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g0146 1321 PRINTS E-class P450 group I signature 1129 1155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g0146 1321 PRINTS E-class P450 group I signature 1259 1282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g0146 1321 PRINTS E-class P450 group I signature 1109 1126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g0146 1321 PRINTS E-class P450 group I signature 1249 1259 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g0146 1321 ProSiteProfiles Zinc finger BED-type profile. 78 135 IPR003656 GO:0003677
Glsi09g0146 1321 SUPERFAMILY Ribonuclease H-like 283 696 IPR012337 -
Glsi09g0146 1321 MobiDBLite consensus disorder prediction 168 189 - -
Glsi09g0146 1321 SUPERFAMILY Cytochrome P450 851 1313 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g0146 1321 MobiDBLite consensus disorder prediction 168 194 - -
Glsi09g0146 1321 Pfam Protein of unknown function (DUF 659) 257 408 IPR007021 -
Glsi09g0146 1321 PANTHER OS08G0547900 PROTEIN 824 1321 - -
Glsi09g0146 1321 Pfam BED zinc finger 83 117 IPR003656 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0146 Glsi-ChrGlsi09 1135010 1143407 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0146 829 1320 Cytochrome P450 AT4G12300 59.519 0.0 630