Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi09g0145 | ATGGATTTCACTAAAGATACTGTCACAGGCCTGCTTCTTGCTTTCTCGGCCATATTCGCACTCGCCTGGGTCTACTTCATCAAACCCAATACCAAGCTGCCACCAGGTCCCCCAGGCCTCCCCTTGTTCGGGAATCTTCTATCCCTTGATCCCGAGCTTCACTCCTATTTCGCGGCTTTGTCTCGGACCTATGGCCCGATACTCAGGCTCCGACTTGGGAACAAACTTGGCTTCGTCGTCAGCTCCCCTTCCCTGGCTCGTCAAGTTCTCAAAGACCTAGATGTGACTTTTGCTAATCGTGACGTGCCTGCTGCGGGCAGAGCAGCAAGCTACGGCGGATCTGATATAGTTTGGACCCCCTATGGACCCGATTGGCGAATGCTGAGAAAAGTTTGTGTGCTCAAGATGCTTAGCAACAGCACCTTGGATTCTGTCTATTCCATCCGTCGCAGGGAGGTCCGAAAAACTGTCGATTATCTATATACTCAGGTGGGATCTCCGATTGATATCGGGGAGCACATGTTTCTTTCTATACTGAATGTGGTCACCAACATGTTGTGGGGCGCCGGGGGTGTTGAGACCGCTTCTTTGGGAGCCGAGTTCAGGGAAGTGGTGGCCAACATGACTTATCTTATGGGGAAGCCCAACGTATCGGATTTCTTTCCCTGGTTGGCTCGCTTTGACTTGCAAGGTATAGAGAAACAGATGCTAATGTTGGTCCGGCGGTTCGATAGAATCTTCGAGAAGATGATTGATCATCGCCTCAAGATGAATGATGAGAATGGAAGCCAAGGATCAGACAGTAAGGATTTCTTGCAGTTCTTATTGAATTTGAAGGATGAGAGAGATTCCAAGACGCCTCTCACCATGACCCACCTTAAGGCTCTGCTCATGGATATGGTGCTGGGTGGAAGTGACACATCCTCTAACACGATTGAGTTTGCGATGGCTGAATTAATGCACAAGCCAGAGGTGATGAAGAGAGTCCAAGACGAATTGGTAAGTGTAGTGGGAAAAGATAACATGGTAGAAGAGTGTCACATTGAGAAGCTGCCGTACTTGCATGCAGTGATGAAAGAAACTCTCCGGTTGCACCCAGTGCTTCCACTATTAGTCCCACACTGCCCAAGTGAAACCTGCACTGTGGGAGGGTACACTGTTCCAAAAGGGTCTCGGGTGTTCGTGAACGTGTGGGCTATACATAGAGACCCTTCCAATTGGGAGAAACCTCTGGAATTCGACCCGACAAGGTTCTTGGACGCTAAACGGGATTACAGTGGGAGTGACTTCAAGTATTTCCCATTTGGGTCTGGGCGAAGAATATGTGCAGGAACTGCCATGGCGGAGAGGATGTTTTTGTATTCTGTCGCAACACTAGTGCACTCCTTTGACTGGAAAGTACCCCAAGGCCAAGGGTTGGATCTTTCTGAGAAGTTTGGCATAGTACTGAAAAAGAAAATACCTCTGCTAGCCATCCCCACGCCACGATTATCTAACCCGGCTCTCTATCAATAG | 1515 | 0.4917 | MDFTKDTVTGLLLAFSAIFALAWVYFIKPNTKLPPGPPGLPLFGNLLSLDPELHSYFAALSRTYGPILRLRLGNKLGFVVSSPSLARQVLKDLDVTFANRDVPAAGRAASYGGSDIVWTPYGPDWRMLRKVCVLKMLSNSTLDSVYSIRRREVRKTVDYLYTQVGSPIDIGEHMFLSILNVVTNMLWGAGGVETASLGAEFREVVANMTYLMGKPNVSDFFPWLARFDLQGIEKQMLMLVRRFDRIFEKMIDHRLKMNDENGSQGSDSKDFLQFLLNLKDERDSKTPLTMTHLKALLMDMVLGGSDTSSNTIEFAMAELMHKPEVMKRVQDELVSVVGKDNMVEECHIEKLPYLHAVMKETLRLHPVLPLLVPHCPSETCTVGGYTVPKGSRVFVNVWAIHRDPSNWEKPLEFDPTRFLDAKRDYSGSDFKYFPFGSGRRICAGTAMAERMFLYSVATLVHSFDWKVPQGQGLDLSEKFGIVLKKKIPLLAIPTPRLSNPALYQ | 504 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi09g0145 | 504 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 435 | 444 | IPR017972 | GO:0005506|GO:0016705 | |
| Glsi09g0145 | 504 | SUPERFAMILY | Cytochrome P450 | 34 | 496 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi09g0145 | 504 | PRINTS | P450 superfamily signature | 433 | 442 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi09g0145 | 504 | PRINTS | P450 superfamily signature | 303 | 320 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi09g0145 | 504 | PRINTS | P450 superfamily signature | 356 | 367 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi09g0145 | 504 | Gene3D | Cytochrome P450 | 27 | 489 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi09g0145 | 504 | PRINTS | E-class P450 group I signature | 355 | 373 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi09g0145 | 504 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi09g0145 | 504 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi09g0145 | 504 | PRINTS | E-class P450 group I signature | 442 | 465 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi09g0145 | 504 | PRINTS | E-class P450 group I signature | 292 | 309 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi09g0145 | 504 | PRINTS | E-class P450 group I signature | 432 | 442 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi09g0145 | 504 | PRINTS | E-class P450 group I signature | 312 | 338 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi09g0145 | 504 | PRINTS | E-class P450 group I signature | 396 | 420 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi09g0145 | 504 | CDD | CYP76-like | 61 | 493 | - | - | |
| Glsi09g0145 | 504 | PANTHER | OS08G0547900 PROTEIN | 9 | 504 | - | - | |
| Glsi09g0145 | 504 | FunFam | Cytochrome P450 - like protein | 24 | 490 | - | - | |
| Glsi09g0145 | 504 | Pfam | Cytochrome P450 | 34 | 486 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi09g0145 | Glsi-ChrGlsi09 | 1108223 | 1109819 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi09g0145 | 12 | 503 | Cytochrome P450 | AT4G12300 | 58.517 | 0.0 | 621 |