Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0140 ATGAATTCCGTTCATTTCCTCCTTTCTCTGTTTTTTCTATTGGTTGCATTTCCTGGTCCGCAGCGGGTTCGAGGAAATGCGGAGGTTAGAGCTCTGATGGAGTTGAAGTCCTCTCTGGATCCAGAGGGCAAGTTCCTAAGCTCGTGGACCAGTGATGGTGACCCATGTAGTGGTTCGTTCGAAGGGATAGCATGCAACGATCACCAGAAAGTGGCCAACATTTCCCTGCAAGGGAAGGGCCTTTCGGGCTGGGTGTCTCCGGCGGTGGCTGAACTCAAATGTTTGTCAGGTTTATACCTGCATTACAACAATCTGTCGGGGCAGATACCAACAGAGATTTCAAATCTCACTGAATTGGTCGATCTCTATCTCAACGTAAATAATCTATCTGGAAACATTCCTCCTGAGGTCGGGAGCATGGCTAGTCTCCAAGTGTTGCAATTAGGCTACAACCGGCTTGTGGGGACTATACCTGCCCAGATGGGTTCCTTGAAACAGCTTACTGCTCTAGCTTTGCAATATAACAAATTAAGCGGTCAAATTCCTCTAAGCCTGGGGAACTTGGGGATGCTACGGATGCTAAATTTGAGCTTTAACAACTTCAATGGTGCAATCCCTGCAACACTTGCTGTTATTGCACATTTGGAAGTTCTAGATATTCAAAACAATTCTCTATCAGGAATTGTTCCTTCTGCACTGAAGAAATTGAAGGAAGGATTCCAGGGTACAAACAACCCAGATTTATGTGGACTTGGGTTTTCCACTTTGAGAGCTTGCAACAAAGATCAAAATGTATATGTTAACCAGATTGACGCCTCAAATCCATCCACAAAAAGTATTCCTTCAAAGGATTTTCCTGAGCCAGCAAATTTTCAGTTGCATTGTAACCAGACTCATTGCTCCAAATCAAGAAGATTTCCTCAATCTCTCATTGCGGCAAGTGTTATAACTATCACTTTCACATTCATAGGCGCTGGATTTTTTACTTTTGTCAGATACCGCCGCCAAAAGCAGAGAATTAGGAATACATCAGAATCTTCTGAAGGGCAACTTAGTCCTGACCAACCTAAACAGTTCTATAAAAGAAGTCCATCTCCACTTGTTAATCTCGAGTATTATAATGGATGGGATTCATTGGCTGATGGTCAAAATGGCAGTGGATTACCCCATGAGTATCTCAACCAATTTAGGTTTAATGTAGATGAGATTGAATCTGCGACACAGTACCTTTCTGAGGCCAACTTATTGGCTAAGAGCAAATTCTCAGCAGTCTATAAAGGAGTTCTCAGGGATGGTTCTCTTGTGGCTATTAGAAGCATTAATGTGACATGCTGCAAGACCGAAGAAGCTGAATTTGTAAATGGGTTGAACTTATTAACCTCTCTGAGACATGAAAACCTTGCTAGGCTGAGAGGTTTCTGTTGCTCCAGGAGCAGAGGTGAATGTTTCCTTATCTATGACTTTGCCCCTAATGGTGACCTGTCTCAATATCTTGACATGGAAGATGGAAGTGGTCATGTTCTCGAGTGGTCCAAGAGGGTTTCTATCATCAAGGGCATTGCAAAAGGTATTGGATATCTGCACAGCAATGAAGCAAACAAACCTACAATAGTACACCAAAATGTTTCCGTAGAAAAAATTGTCCTTGACCATCAGTTTAACCCATTGATTATGGATTCTGGCCTCCCTAAGCTTCTTGCAGATGATGTTGTTTTCTCGGCTCTTAAAGTGAGTGCTGCCATGGGATACCTGGCTCCTGAATATATTACTACTGGCCGCTTTACGGAGAAAAGTGACATATATGCATTCGGGGTTATTGTCCTTCAAGTTCTATCTGGGAAGAAAACAATAGGTGGTTCAATCAGGATGGCAGTTGAGTCCTTCAGATTTGAAGATTTTGTTGACACAAATCTGCAGGGAAGATATGCTAAATCTGAAGCAGCAGTTCTTGCGAAGCTGGCAACGCTGTGCACCCATGAGCTTCCTGACCAAAGGCCAACCACGGCGGAGGTCATTCAGGAACTCAGTGCGTTTCCTGCATATTAA 2046 0.433 MNSVHFLLSLFFLLVAFPGPQRVRGNAEVRALMELKSSLDPEGKFLSSWTSDGDPCSGSFEGIACNDHQKVANISLQGKGLSGWVSPAVAELKCLSGLYLHYNNLSGQIPTEISNLTELVDLYLNVNNLSGNIPPEVGSMASLQVLQLGYNRLVGTIPAQMGSLKQLTALALQYNKLSGQIPLSLGNLGMLRMLNLSFNNFNGAIPATLAVIAHLEVLDIQNNSLSGIVPSALKKLKEGFQGTNNPDLCGLGFSTLRACNKDQNVYVNQIDASNPSTKSIPSKDFPEPANFQLHCNQTHCSKSRRFPQSLIAASVITITFTFIGAGFFTFVRYRRQKQRIRNTSESSEGQLSPDQPKQFYKRSPSPLVNLEYYNGWDSLADGQNGSGLPHEYLNQFRFNVDEIESATQYLSEANLLAKSKFSAVYKGVLRDGSLVAIRSINVTCCKTEEAEFVNGLNLLTSLRHENLARLRGFCCSRSRGECFLIYDFAPNGDLSQYLDMEDGSGHVLEWSKRVSIIKGIAKGIGYLHSNEANKPTIVHQNVSVEKIVLDHQFNPLIMDSGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIVLQVLSGKKTIGGSIRMAVESFRFEDFVDTNLQGRYAKSEAAVLAKLATLCTHELPDQRPTTAEVIQELSAFPAY 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0140 681 Gene3D Ribonuclease Inhibitor 181 249 IPR032675 -
Glsi09g0140 681 FunFam Protein NSP-INTERACTING KINASE 2 381 488 - -
Glsi09g0140 681 Gene3D Transferase(Phosphotransferase) domain 1 489 678 - -
Glsi09g0140 681 MobiDBLite consensus disorder prediction 343 359 - -
Glsi09g0140 681 Pfam Protein tyrosine and serine/threonine kinase 414 675 IPR001245 GO:0004672|GO:0006468
Glsi09g0140 681 Pfam Leucine Rich Repeat 214 236 IPR001611 GO:0005515
Glsi09g0140 681 Gene3D Ribonuclease Inhibitor 25 180 IPR032675 -
Glsi09g0140 681 FunFam Protein NSP-INTERACTING KINASE 2 25 174 - -
Glsi09g0140 681 FunFam Protein NSP-INTERACTING KINASE 2 489 679 - -
Glsi09g0140 681 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Glsi09g0140 681 SUPERFAMILY Protein kinase-like (PK-like) 386 675 IPR011009 -
Glsi09g0140 681 MobiDBLite consensus disorder prediction 341 362 - -
Glsi09g0140 681 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 73 676 - -
Glsi09g0140 681 SUPERFAMILY L domain-like 28 236 - -
Glsi09g0140 681 Pfam Leucine rich repeat 142 201 IPR001611 GO:0005515
Glsi09g0140 681 Gene3D Phosphorylase Kinase; domain 1 384 488 - -
Glsi09g0140 681 ProSiteProfiles Protein kinase domain profile. 410 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0140 Glsi-ChrGlsi09 1061502 1065247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0140 10 523 Miscellaneous Gene Families AT4G22730 60.076 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Glsi09g0140 PK_Tyr_Ser-Thr 5.8e-34 CL0016