Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0128 ATGGAGGGCAAGGATGGTGTTAATAGCGGGGTTGCGGTGGTCGGATCAGATGCTCCGTCGGACTACCATGTAGCTCCGAGGACTGAAAACCTATCTTCCCCTGCTGGAACAACAACAGCTACACCGATGCCGGCTCCTCAAGAGAGTGTCCCACTACCGCAGCCGGCAGCGTTGGTGGTGGCGCCGGCAACCACAGCGATGCCGGTGAAGAAAAAGAGGGGTCGGCCAAGAAAGTATGGGCCAAACGGGTCGGTGACTGTGCCACTATCTCCCGAGCCAATATCTTCCTCAGCTCCACCGTCAGTAATCGATTTCTCGGCGGGGAAACGCCACAAAGTGCGGTCAGCTAGCTCAGTGAGCAAAGCCAAATTTGAATTGGAGAATTCTGCTGTGACTTTTCCCATTCTTCCCTCCAACCTTTTAAATCTTTCCCTATTTGACATTCTTACAACTTCATCACTTCTTGAGATGGAAAATCCTACATTACATGCACTACTTTCATCATATGAGGATGTTACTATGAAGATAATTTCATTTTCTCAGCAAGGGCCTCGAGCTATATGCATCCTTTCTGCAAATGGTGTCATATCAAGTGCCACACTTCGTCAGCCTGATTCTTCAGGGGGCACATTGACATATGAGGGACGGTTTGAAATTCTGTCATTATCTGGCTCATTCATGCCAAATGAAAGTGGAGGAGCACGGAGCAGATCTGGTGGCATGAGTGTTTCTTTAGCAAGTCCAGATGGACGTGTTGTAGGGGGTGGAGTGGCTGGTCTATTGGTAGCTGCAAGTCCTGTGCAGGTAGTGATAGGCAGTTTTCTGGCAGGAAACCAACAAGAGCAGAAGCCAAAAAAACAGAAACACGAGCCAATATCAACTCCCACGCCAATTGCAGCTGTTCCCTCGTCTACTGCTTATCCAATACATAACCTCTCATCTCCATCATCCTTCCGTGGTGAAAATTGGTCTGCATTGCCAGCAGATACGAGGAATAAGCTAACTGACATTAATGTGTCGCTGCCCACAGGATAA 1035 0.487 MEGKDGVNSGVAVVGSDAPSDYHVAPRTENLSSPAGTTTATPMPAPQESVPLPQPAALVVAPATTAMPVKKKRGRPRKYGPNGSVTVPLSPEPISSSAPPSVIDFSAGKRHKVRSASSVSKAKFELENSAVTFPILPSNLLNLSLFDILTTSSLLEMENPTLHALLSSYEDVTMKIISFSQQGPRAICILSANGVISSATLRQPDSSGGTLTYEGRFEILSLSGSFMPNESGGARSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVIGSFLAGNQQEQKPKKQKHEPISTPTPIAAVPSSTAYPIHNLSSPSSFRGENWSALPADTRNKLTDINVSLPTG 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0128 344 CDD DUF296 170 251 IPR005175 -
Glsi09g0128 344 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 38 317 IPR039605 GO:0003680
Glsi09g0128 344 SUPERFAMILY AF0104/ALDC/Ptd012-like 164 278 - -
Glsi09g0128 344 Pfam Plants and Prokaryotes Conserved (PCC) domain 168 274 IPR005175 -
Glsi09g0128 344 MobiDBLite consensus disorder prediction 68 93 - -
Glsi09g0128 344 MobiDBLite consensus disorder prediction 26 45 - -
Glsi09g0128 344 ProSiteProfiles PPC domain profile profile. 156 296 IPR005175 -
Glsi09g0128 344 FunFam AT-hook motif nuclear-localized protein 1-like 163 291 - -
Glsi09g0128 344 MobiDBLite consensus disorder prediction 1 51 - -
Glsi09g0128 344 Gene3D - 163 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0128 Glsi-ChrGlsi09 974109 978067 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0128 3 341 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 53.740 1.15e-101 301