Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0124 ATGGTTGGACTTTTCCTTGAGGGCGGAGGTTATAGATCAGAGAGAGAGAAAGAAAGGAAGGCCGACAAAGAGCATCTTTCAATGCATGGGTTTTATGCCCGAGAGAGGAGCTCATGTGGCGTCTTTTTAAAATTGAGTTTCAGCAGCAAACTCTGGGCCGCTCGTGCCTCGCGCTTCTTTCCACTGTCTGTATCTGTGCCCTCCGCCCTGTCAGCCCTACCCACGCGTCTTTTACTCTTTTCCTCTCTCCCCAACACTCTGGATTATGCCGTCAACCCGTGCTCTCCCACCAACCTTACACCCTTTCAACGGCCTGGTTCTGATCCTATGCGGGTTTTCTCTGAAAAATGCACCAACCCCAGTTTCAGCTCTACGCTGCTGTACAAATTAAAAATGTTTGTTGGTGTATGCAAGGAAGTGAGAGGTGGTCGATCTGAGATGGACCCAATTACAGCACACGGCTCTCTTCCTCCTCCTTTCCATCTACAACATCAATTTCACTCTTTACAGCAAAACACAGAAGATGAGCAAAGCGGAAGCAGCGGTGGCCAGAAAAGGGAGCGCGAAGAAACCAGCAACAACAGTGATGGCAAGGAAGTGGGTGGGGGTGAAGGTGAAATGACAAGACGACCTAGAGGAAGACCCGCAGGATCCAAGAACAAACCCAAGCCACCCATTATCATCACGCGTGATAGCGCAAATGCCCTGAGAACCCACGTGATGGAGGTAGGGGATGGGTTTGATATAGTAGAGAGCATCTCCAACTTCGCCAGGCGGCGCCAAAGAGGGGTTTGCATTATGAGTGGGACTGGGACGGTCACCAATGTGACTCTGAGACAACCAGCTTCTTCTGGAGCTGTTGTCACTCTTCACGGAAGGTTCGAGATATTGTCGCTGGCTGGGTCATTTTTACCACCACCCGCTCCTCCAGCTGCCTCCGGATTGACCATATATTTGGCAGGCGGCCAAGGGCAGGTGGTTGGGGGAACTGTTGTTGGCACCCTCATCGCTTCGGGCCCGGTGGTCATCATGGCTGCTTCATTTAGCAACGCTGCCTATGAGAGGCTGCCTTTGGAAGAAGAGGATCCTTCGCTCCCTCTGCAAGCAGGTGCTATGGGATCTCCCACTGGAGTTGGTCAGCAGCAGCAGCCTCAACAGCCACAGCTTTTAGGGGATGCCACTGCTCCACTTTTCCATGGTTTGCCTCCTAATCTTCTCAATTCTATTCAGATGCCATCATCAGAACCATTCTGGGCTTCTGCTCGCCCTCCATACTGA 1278 0.5188 MVGLFLEGGGYRSEREKERKADKEHLSMHGFYARERSSCGVFLKLSFSSKLWAARASRFFPLSVSVPSALSALPTRLLLFSSLPNTLDYAVNPCSPTNLTPFQRPGSDPMRVFSEKCTNPSFSSTLLYKLKMFVGVCKEVRGGRSEMDPITAHGSLPPPFHLQHQFHSLQQNTEDEQSGSSGGQKREREETSNNSDGKEVGGGEGEMTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEVGDGFDIVESISNFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGTVVGTLIASGPVVIMAASFSNAAYERLPLEEEDPSLPLQAGAMGSPTGVGQQQQPQQPQLLGDATAPLFHGLPPNLLNSIQMPSSEPFWASARPPY 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0124 425 Gene3D - 236 365 - -
Glsi09g0124 425 FunFam AT-hook motif nuclear-localized protein 236 363 - -
Glsi09g0124 425 MobiDBLite consensus disorder prediction 180 195 - -
Glsi09g0124 425 Pfam Plants and Prokaryotes Conserved (PCC) domain 237 350 IPR005175 -
Glsi09g0124 425 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 172 419 IPR014476 GO:0003680
Glsi09g0124 425 ProSiteProfiles PPC domain profile profile. 233 369 IPR005175 -
Glsi09g0124 425 MobiDBLite consensus disorder prediction 374 390 - -
Glsi09g0124 425 MobiDBLite consensus disorder prediction 364 396 - -
Glsi09g0124 425 SUPERFAMILY AF0104/ALDC/Ptd012-like 233 363 - -
Glsi09g0124 425 CDD DUF296 237 304 IPR005175 -
Glsi09g0124 425 MobiDBLite consensus disorder prediction 169 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0124 Glsi-ChrGlsi09 951892 955450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0124 147 425 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 55.758 1.61e-85 262