Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0106 ATGGCTCATTTTGCTTATGGTGAAACTCTATCTTTTGGAGGCTCACACCATGGACAGGGACAACAAGTTATTCCCTTTCCAACCACTATGAGTTCCTTAAAGTTCTTGCTTTTACATGGAAACTTAGATATATGTGTCAAAGAGGCCAGAATCCTACCGAACATGGATATGTTTCATAAGAAAATGGGGGAAATGTTTTCCAGATTACCTGGAAAACTTGGCGACAAGATTGAAGGGCATATGTCCCATAAGATAACCAGTGATCCATATGTAACGGTATCTGTGGCGAGTGCCGTAATTGCCAGGACATTTGTAATCAGGAACGACGAGAACCCTGTTTGGAAGCAGCATTTCAGGGTTCCTGTAGCACACTATGCTGCGGAAGTACACTTTATTGTAAAGGACAGCGATATTGTGGGCTCGCAGATCATTGGAGCAGTGGGAATTCCAGTGGAACAGTTATATAGTGGCACAAAAGTTGAGGGATCTTTTCCCATCCTTAATTCTAGTGGGAAACCCTGTAAAACTGGAGCAGTTTTGAGTTTATCGATTCAATACACTCCTCTTGATAAGGTGGCCCTTTATCGTGATGGAGTGGGTGCAGGTCCAAATTATGAAGGGGTCCCTGGTACATACTTTCCCCTTAGGAAGGGTGGCACAGTTAGACTTTATCAAGACGCTCATGTTCATGAAGGTTGCCTTCCCAATTTGAAGATGGAAGGTGATGTAAGTTATAAGCATGGCAGTTGTTGGCATGACATCGTTGATGCAATAAGTCAGGCCCGTCGATTAATATACATTGTGGGTTGGTCTGTGTACCACAGTGTTAGACTGATTCGGGATACTAATGATGCAAAAGCTTCCACGTTAGGTGATCTTCTCAAAATCAAATCACAGGAAGGTGTGAGAGTGCTGCTCCTTGTATGGGATGATCCTACTTCTAGAAGTCTGTTTGGATATAGAGCGGGTATTGACTATTTCTTTGCACTAAATGTTTCTATGGATGTTATCTACCCTAGTGCTGCTGCTGTCATGAAAAGAAGGGAACAGTCTGAGTTCCGTACTGTTGATAACTCAATGAGGCATCAAAGCAGAGTAGTTTCATATACTGGTTTTCTTTTGATGCTTTCATATTCAGGACAGCTTGTCTGCTATGCCCGGTTACTTTCCGGAACCATCTATACTCATCATCAGAAAACAGTGATTGTGGATGCGGATGCAGGCCAGCATAAAAGAAAGATTATAGCTTTCATTGGAGGTCTTGATTTATGTGACGGCCGATACGATACACCTGAGCATTCTATCTTTAGGACTTTGCAGACAACGCACAAAGATGACTATCATAACCCGAACTTCGTGGGGCCTCTTACTGGTTGTCCAAGACAACCTTGGCATGATTTGCATTCACAAATTGATGGTCCGGCTGCGTATGACATCCTCACCAATTTTGAGGAGCGTTGGTTGAAGGCGTTAAAGTTGCAGGGACTTCACAAGATGAAAAGTTCATATGAAGATTCATTACTCAACATTGATAGAATCCCTGATATCGCTGGCATTGCTGATGTTCCTTGCCTCAATGAAGATAACCCAGGGGCTTGGCATGTCCAGGTTTTCCGTTCAATTGATTCTAATTCTGTCAAAGGATTTCCCAAGGAACCCAAGGATGCTATAAGAAGGAACTTGGTTTGCGGAAAGAATGTACTTATAGACATGAGCATACACTCTGCATACGTGAAAGCAATCCGAGCTGCCCAAAAGTTCATCTATATTGAGAACCAATACTTTCTTGGCTCCTCATATAATTGGGATTCTCACAAAGACTTAGGTGCAAATAACTTAATTCCAATGGAAATTGCTCTCAAAATAGCCTCCAAAATTAAACAAAATGAGCGGTTCTCTGCCTATATTGTCATTCCTATGTGGCCTGAAGGTGTACCCACAAGTACAGCCACCCAGCGGATTCTCTTTTGGCAGTTCAAAACAATGCAAATGATGTACGAAACGATTTACAAGGCCTTACAGGAGGCTGGACTTGACAAAGAGTATGAACCACAGGACTACTTAAATTTCTTTTGCCTTGGGAATCGTGAGGCCCCAGATAACCAAAACATTTTAAATGCTATAAATCCTGCTGGAGAGAACACACCTCAGGTGCATGGATATAGAATGTCACTGTGGGGAGAACATATAGGAGGCGTGGAAAAATGTTTCGAGGAACCAGAGAGGGTTGAATGCGTGAGACGGATAAGGTCATTGAGTGAGCTTAACTGGAGACAGTACGTAGCTGATGAGGTAACTGAAATGAAAGGGCATTTATTAAAATATCCACTTCAAGTCGATTCAGTGGGGAAGGTGAAGCCTCTTCCTGGCTTTGAGACCTTCCCGGATGTTGGTGGCAGCATTAAGGGTACTTTTACAGTCATTCAAGAAAATCTCACCATCTGA 2445 0.427 MAHFAYGETLSFGGSHHGQGQQVIPFPTTMSSLKFLLLHGNLDICVKEARILPNMDMFHKKMGEMFSRLPGKLGDKIEGHMSHKITSDPYVTVSVASAVIARTFVIRNDENPVWKQHFRVPVAHYAAEVHFIVKDSDIVGSQIIGAVGIPVEQLYSGTKVEGSFPILNSSGKPCKTGAVLSLSIQYTPLDKVALYRDGVGAGPNYEGVPGTYFPLRKGGTVRLYQDAHVHEGCLPNLKMEGDVSYKHGSCWHDIVDAISQARRLIYIVGWSVYHSVRLIRDTNDAKASTLGDLLKIKSQEGVRVLLLVWDDPTSRSLFGYRAGIDYFFALNVSMDVIYPSAAAVMKRREQSEFRTVDNSMRHQSRVVSYTGFLLMLSYSGQLVCYARLLSGTIYTHHQKTVIVDADAGQHKRKIIAFIGGLDLCDGRYDTPEHSIFRTLQTTHKDDYHNPNFVGPLTGCPRQPWHDLHSQIDGPAAYDILTNFEERWLKALKLQGLHKMKSSYEDSLLNIDRIPDIAGIADVPCLNEDNPGAWHVQVFRSIDSNSVKGFPKEPKDAIRRNLVCGKNVLIDMSIHSAYVKAIRAAQKFIYIENQYFLGSSYNWDSHKDLGANNLIPMEIALKIASKIKQNERFSAYIVIPMWPEGVPTSTATQRILFWQFKTMQMMYETIYKALQEAGLDKEYEPQDYLNFFCLGNREAPDNQNILNAINPAGENTPQVHGYRMSLWGEHIGGVEKCFEEPERVECVRRIRSLSELNWRQYVADEVTEMKGHLLKYPLQVDSVGKVKPLPGFETFPDVGGSIKGTFTVIQENLTI 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0106 814 Pfam Phospholipase D Active site motif 393 427 IPR001736 GO:0003824
Glsi09g0106 814 SUPERFAMILY Phospholipase D/nuclease 561 656 - -
Glsi09g0106 814 Gene3D Endonuclease Chain A 236 509 - -
Glsi09g0106 814 PANTHER PHOSPHOLIPASE D 716 803 IPR015679 -
Glsi09g0106 814 SUPERFAMILY Phospholipase D/nuclease 211 491 - -
Glsi09g0106 814 FunFam Phospholipase D delta 35 182 - -
Glsi09g0106 814 Gene3D C2 domain 36 176 IPR035892 -
Glsi09g0106 814 CDD C2_plant_PLD 36 187 - -
Glsi09g0106 814 PIRSF PLD_plant 705 814 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Glsi09g0106 814 PIRSF PLD_plant 338 716 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Glsi09g0106 814 PIRSF PLD_plant 28 326 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Glsi09g0106 814 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 33 189 IPR035892 -
Glsi09g0106 814 Gene3D Endonuclease Chain A 525 707 - -
Glsi09g0106 814 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 392 427 IPR001736 GO:0003824
Glsi09g0106 814 ProSiteProfiles C2 domain profile. 20 164 IPR000008 -
Glsi09g0106 814 Pfam C2 domain 40 166 IPR000008 -
Glsi09g0106 814 SMART C2_3c 41 163 IPR000008 -
Glsi09g0106 814 Pfam Phospholipase D C terminal 734 804 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0106 Glsi-ChrGlsi09 850911 855821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0106 717 814 Phospholipase D Gene Family (Wang group) AT2G42010 62.245 8.35e-38 150