Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0090 ATGGGCAAGGCATCAAAATGGTTTCGCTCTCTTCTCGGTCTAAAAAAGGCTGACTCGTCGTTTCCTGCTGGCTCAGCTCCAAAACCACCAAAAGACAAACGCCGATGGAGCTTCGTCAAATCTTACAGAGAAAATAACCACCACCATGCTACCATTAACAAACCCGGTGACCACCACACAACGTTCGGAGAGGTGGCTGTTCAATCATCGGGACACGTAGACGGCGTATATCCCGACAAGCACGCCATAACAATGGCTGCCGCCACTGCTGCCGTGGCGGAGGCGGCTGTGGCTGCTGCTCAGGCTGCGGCTGCTGTAGTCAGGCTCACAAGCAGCGGCAGATGCCCCGGTAACGCGGTGGAGGCGGCTGCGAATGTTGCTGGAGGCATTGGGACTCGGGAACAATGGGCTGCCATTAAGATTCAATCTGCTTTTCGGGGCTGTTTGAATCGAGCTTTAGTATGGAAGAACTGGAACAACGACTCTTTTACTTTCCGAAAACGACAGGACGGCCTTGCAGATTTGGGCTATTTGCAGGACGATTCCTTTTTAAGTCTTTCATTTGGTTGCTGCGAAGCTGATGTTCTTTCTATTTCTTCTTCCTTTATTGACCTGTTCCATTATGTCGATACGATGGTAAAAGATCTGTGGTTTGAGGATGTGTTTCCCGAAGTGGACTCGTATGTATTTTCCAAGATAAATTGTGGGGTTTGTCGAGTGTTGACGACTACAATTCTTAATGCAAGGAGAGCACTGCGAGCATTAAAAGGATTGGTGAAGCTCCAGGCATTGGTGAGAGGTCACATCGAGAGGAAGCGGACCGCAGAGTGGTTGCAAAAGATGCAAGCACTTGTTCGTGCACAGGCACGAGTCCGTTCAGAGCGTGCTCAAATTCTGCAGACCCCATATTCGATTGCTAAGTCATCTAACGTCCACCTCCACGGTCCAGCAACACCAGAAAAATTTGAAAGTCCAATCAGCTCCAAGGGCATGAAATTTGATCAGTCATCATTACTCAAGAGAAATGGGTCCAGATCCCATGTTCAGATTCATGGCAGTCAAGAGAAATGTTGGAATAAATCAGATAGTCGGTTGGATGAACAATCATGTAGTCAACAGAGATCTTCAGCGAGAACTAGTAGTTTGGATGATGAAAAAAGTGTCAGGATCCTCGAAATTGATTCTGGAAAACCACACTTTACACCAAAACGCAGAAACCTCTTTCACTCCACTAACCATTTTTTTGTTTCTGATAATTATAGTCGAAGTTTGACCCCCACAAAGGACTCAACAACTCGTCAATCAGATCAGAATTCATCTTCTTGTGAAGTTCAATCTTTCAACCCGCTAAAAGTTGACGAGGCTGTGGAGAGTCCATTCTGCACTGCCGACAGTAGTCCTCAATTCTTTTCTGCCTCCTCAAGGGATTGTGGCCCCAAAAGTAGTCCGTTTACTCCTACCAAGAGTGGCGGCTCAAGAAGCTATCTAAGTGGTTATTCTGACTACCCCAGTTACATGGCTTACACTGAATCTTCAAAGGCAAAGGTCAGATCACTGAGTGCTCCAAAACAAAGGCCCCAATTTGAGAGGTCAAGTTCATCTAGTAGATACTCGGTTCAAGGATTTGGCGAGTCGAGATGGAGCACGCAGAGGGCAACTGCATTGCACTCCAGCAAAGCTTATCCAGGTTCTGGTCGTTTGGACAAGCTTGGTATGCCGGTGGGGCATGGATATTGA 1737 0.4721 MGKASKWFRSLLGLKKADSSFPAGSAPKPPKDKRRWSFVKSYRENNHHHATINKPGDHHTTFGEVAVQSSGHVDGVYPDKHAITMAAATAAVAEAAVAAAQAAAAVVRLTSSGRCPGNAVEAAANVAGGIGTREQWAAIKIQSAFRGCLNRALVWKNWNNDSFTFRKRQDGLADLGYLQDDSFLSLSFGCCEADVLSISSSFIDLFHYVDTMVKDLWFEDVFPEVDSYVFSKINCGVCRVLTTTILNARRALRALKGLVKLQALVRGHIERKRTAEWLQKMQALVRAQARVRSERAQILQTPYSIAKSSNVHLHGPATPEKFESPISSKGMKFDQSSLLKRNGSRSHVQIHGSQEKCWNKSDSRLDEQSCSQQRSSARTSSLDDEKSVRILEIDSGKPHFTPKRRNLFHSTNHFFVSDNYSRSLTPTKDSTTRQSDQNSSSCEVQSFNPLKVDEAVESPFCTADSSPQFFSASSRDCGPKSSPFTPTKSGGSRSYLSGYSDYPSYMAYTESSKAKVRSLSAPKQRPQFERSSSSSRYSVQGFGESRWSTQRATALHSSKAYPGSGRLDKLGMPVGHGY 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0090 578 MobiDBLite consensus disorder prediction 309 328 - -
Glsi09g0090 578 Pfam Protein of unknown function (DUF4005) 475 539 IPR025064 -
Glsi09g0090 578 MobiDBLite consensus disorder prediction 517 557 - -
Glsi09g0090 578 MobiDBLite consensus disorder prediction 419 444 - -
Glsi09g0090 578 MobiDBLite consensus disorder prediction 517 578 - -
Glsi09g0090 578 MobiDBLite consensus disorder prediction 360 385 - -
Glsi09g0090 578 Pfam IQ calmodulin-binding motif 136 151 IPR000048 GO:0005515
Glsi09g0090 578 MobiDBLite consensus disorder prediction 472 493 - -
Glsi09g0090 578 ProSiteProfiles IQ motif profile. 134 162 IPR000048 GO:0005515
Glsi09g0090 578 MobiDBLite consensus disorder prediction 364 378 - -
Glsi09g0090 578 ProSiteProfiles IQ motif profile. 256 283 IPR000048 GO:0005515
Glsi09g0090 578 PANTHER IQ-DOMAIN 5-RELATED 1 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0090 Glsi-ChrGlsi09 730395 734042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0090 218 578 IQD Protein Family AT4G23060 38.619 7.06e-55 191