Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0069 ATGAAATTACGTACTTCATTGTTGTTTATCGGTTTAATTTCCATGGTCTCTTTTGTGACTTGTGATACTGTGGCCTCAAATGAAGTTTGGGCACTTTCAACCTTCAAAGAAGCAATCTATGAAGACCCGTTTCTAGTTTTGTCCAATTGGAATACGATGGATTCAGATCCTTGTGATTGGCTTGGTGTTTCATGCACTACGGCCCGAGATCATGTTGTAAAGCTAAACATTTCGGGTTCATCATTGAGGGGATTTCTTGCACCAGAATTGGGACAAATTACCTACTTGCAAGAATTGATTTTGCATGGCAACAATTTGATTGGAATAATACCTAAAGAATTGGGCATGTTGAAATCTCTCAAGGTCTTAGATTTGGGGATGAATCGGCTATCAGGACCAATTCCTCCAGAGATTGGAAATTTAACCCAAGTTGTGAAAATAAACCTGCAGTCCAACGGGTTTACTGGTAGGCTACCCCAAGAGCTTGGAAATTTAAGATACCTTCAAGAACTTCGGTTGGATAGGAATAAGTTTCAAGGACCTGTTCCCGCTGGTAGCAGTTCAAATTTTGCTTCAAATATGCATGGAATGTATGCCTCAAATGCAAATTCAACTGGCTTCTGTCGTTCGTCTCAGTTAAAAATTGCCGATTTTTCTTATAACTTCTTTGTTGGTGGCATACCAAAATGCTTGGAGTATCTTCCAAGATCAAGCTTTCAAGGGAATTGTCTCCAGAGCAAGGACTTAAGGCAGCGCCCTTCTGTGCAATGTGCTGGTGCTTCACCTGCCAAGAGCCATCCAGTGATCAACCCAAAGCATCAACCTGCTGAATATTTGTCCAAGCATCAAGGAACATCAAGACCCACTTGGCTATTGGCTCTAGAAATAGTGACAGGAACCATGTTTGGTTCTGTCTTTCTAGTCGCTGTTCTAACTGCTCTTCAAAGGTTTAACAACAAATCATCTATCATTATTCCTTGGAAGAAATCTGCAAGTGAGAAGGACCATACAACAGTATATATAGAGTCTGAGATGTTGAAGGATGTAATGAGGTATAGCAGACAAGAGCTTGAAGTGGCCTGTGAAGACTTCAGCAATATCATTGGGTCCTCACCTGACAGTGTGGTCTATAAGGGTACAATGAAAGGTGGCCCTGAGATTGCTGTAATTTCCGTCTGCATCAAGGAGGAACACTGGACAGGTTACCTTGAACTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTAAATAATGAGAATACAGGAAAACTACTGGGCTATTGTAGAGAGAACACTCCATTTACAAGGATGCTAGTTTTTGAGTATGCTTCAAATGGGACACTTTATGAGCACCTACATTATGGAGAAGGATGTCAATTATCATGGACCCGGCGTATGAAAATTGTTATAGGCATTGCACGTGGACTCAAATATCTGCACACAGAAGTTGAGCCTCCTTTCACTATCTCAGAGCTAAATTCTAGTGCTGTATACCTTACAGAAGATTTTTCTCCAAAGCTGGTTGATTTTGAAAGTTGGAAGACAATTCTGGAAAGATCAGAAAAGAATTCTGGTTCTGTTGGCAGCCAAGGTGCTATTTGTGTTCTTCCAAATTCCATGGAGGCACGCCATCTTGATACCCAAGGAAACGTATATGCTTTTGGCATACTTCTACTGGAGATAATCAGCGGAAGACCTCCATACTGCAAGGACAAAGGGTACTTGGTGGATTGGGCCAAGGACTATCTTGAAATGCCAGAAGTAATGTCGTATTTAGTGGATCCCGAATTGAAGCATTTTAGATATGATGACCTCAAAGTAATATGTGAGGTAATATATCTCTGTATCAATCCGGACCCCACCAGGCGACCACTTACGCAAGAATTATGTAGTATGCTGGAGAGCAGAATTGACACATCCATAAATGTGGAGCTCAAGTCATCATCTTTGGCTTGGGCTGAACTTGCACTTTCATCATAA 1983 0.414 MKLRTSLLFIGLISMVSFVTCDTVASNEVWALSTFKEAIYEDPFLVLSNWNTMDSDPCDWLGVSCTTARDHVVKLNISGSSLRGFLAPELGQITYLQELILHGNNLIGIIPKELGMLKSLKVLDLGMNRLSGPIPPEIGNLTQVVKINLQSNGFTGRLPQELGNLRYLQELRLDRNKFQGPVPAGSSSNFASNMHGMYASNANSTGFCRSSQLKIADFSYNFFVGGIPKCLEYLPRSSFQGNCLQSKDLRQRPSVQCAGASPAKSHPVINPKHQPAEYLSKHQGTSRPTWLLALEIVTGTMFGSVFLVAVLTALQRFNNKSSIIIPWKKSASEKDHTTVYIESEMLKDVMRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISVCIKEEHWTGYLELYFQREVADLARLNNENTGKLLGYCRENTPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIVIGIARGLKYLHTEVEPPFTISELNSSAVYLTEDFSPKLVDFESWKTILERSEKNSGSVGSQGAICVLPNSMEARHLDTQGNVYAFGILLLEIISGRPPYCKDKGYLVDWAKDYLEMPEVMSYLVDPELKHFRYDDLKVICEVIYLCINPDPTRRPLTQELCSMLESRIDTSINVELKSSSLAWAELALSS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0069 660 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 25 181 - -
Glsi09g0069 660 Gene3D Transferase(Phosphotransferase) domain 1 444 650 - -
Glsi09g0069 660 SUPERFAMILY Protein kinase-like (PK-like) 339 635 IPR011009 -
Glsi09g0069 660 ProSiteProfiles Protein kinase domain profile. 362 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0069 660 Gene3D Ribonuclease Inhibitor 27 139 IPR032675 -
Glsi09g0069 660 Pfam Protein tyrosine and serine/threonine kinase 365 633 IPR001245 GO:0004672|GO:0006468
Glsi09g0069 660 Gene3D Phosphorylase Kinase; domain 1 334 443 - -
Glsi09g0069 660 PANTHER PROTEIN MALE DISCOVERER 2 15 658 - -
Glsi09g0069 660 FunFam Inactive receptor-like serine/threonine-protein kinase 336 443 - -
Glsi09g0069 660 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Glsi09g0069 660 SUPERFAMILY L domain-like 27 235 - -
Glsi09g0069 660 Gene3D Ribonuclease Inhibitor 140 262 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0069 Glsi-ChrGlsi09 599310 603736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0069 3 635 Receptor kinase-like Gene Family AT2G01210 26.279 4.13e-56 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Glsi09g0069 PK_Tyr_Ser-Thr 1.4e-20 CL0016