Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0030 ATGAACGACACAGATGTCTCCAAGCAAATCCAGCAGATGGTGAGGTTTATCCGCCAGGAAGCGGAGGAAAAAGCCAACGAGATCGCTGTCTCTGCCGAAGAAGAATTCAACATCGAGAAGTTGCAGTTGGTTGAAGCCGAGAAGAAGAAGATCAGACAAGAATACGAGCGTAAAGAGAAGCAAGTCGAAATTCGGAAGAAGATTGAGTACTCTATGCAGCTGAATGCTTCTCGAATAAAAGTTCTTCAAGCTCAAGATGATGTGATTAATTCCATGAAAGAAGCTGCATCCAAGGAACTTTTGAATGTGAGCCGTGACCACCATGTGTACAGAAACCTGCTGAACGATCTTATTGTTCAGAGTCTGCTGAGACTGAGAGAACCTTCTGTCCTATTGCGATGTCGGAAAGACGATCTGCATTTAGTAGAGCATGTGCTGGATACTGCTGCACAGGAGTATGCTGATAAAGCTAATGTCCATCCTCCGGAGATCATTGTTGACAAGCAAGTCTATCTTCCACCTGCACCCAGCCATCATGATACCCATAGTCCCTTCTGCTCTGGAGGGGTGGTGTTGGCTTCTCGAGATGGGAAGATTGTCTGTGAAAATACCCTTGATGCACGATTGGATGTAGTATTCCGTAAAAAGCTTCCAGAGATCCGCAAGCAGCTCTTTGGACAAGTTGCTTGA 690 0.4565 MNDTDVSKQIQQMVRFIRQEAEEKANEIAVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVINSMKEAASKELLNVSRDHHVYRNLLNDLIVQSLLRLREPSVLLRCRKDDLHLVEHVLDTAAQEYADKANVHPPEIIVDKQVYLPPAPSHHDTHSPFCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQVA 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0030 229 Hamap V-type proton ATPase subunit E [atpE]. 8 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Glsi09g0030 229 Gene3D - 92 229 IPR038495 -
Glsi09g0030 229 SUPERFAMILY V-type ATPase subunit E-like 87 226 - -
Glsi09g0030 229 Gene3D - 1 62 - -
Glsi09g0030 229 Pfam ATP synthase (E/31 kDa) subunit 16 225 IPR002842 GO:0033178|GO:0046961|GO:1902600
Glsi09g0030 229 Coils Coil 29 61 - -
Glsi09g0030 229 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 227 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0030 Glsi-ChrGlsi09 297574 300473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0030 1 229 Primary Pumps ATPases(2) AT4G11150 76.856 1.45e-129 363