Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0019 ATGACGCGAGAGGAATTTCAGAACGGAAGGGATGACATGCTTATCGATGGATGTGAAGCAGAAGTGCCTGAGCAAATGCAGGGGAGTGCTGTTCCTATTGAGTTCAATTCGAATTACCTCAAAGTATATTACGGAAAGCTATTTCCTTATGCTGATGTTTTCAGATGGATGTCTTACGGCAATGATGCGAAGCATCCGGCTTGTGATCCTTCTTACTTCGGCCGAAGGGAATTTTCATTCACCCTCGAAAATGATATATATCTGAGGTTCCAATCTTTCAACAGTGCCGCCGAACTTGAAAACTCCATCAAAGAGAAGTGCCCCTTGAAGATTGATATTGGACCTGTGTATAGCGTGGATCCTGCAAAAAGGCACGCCTACGCACAGAGTGGTGATAATGTTTTCACTCCAGTTGAGAGGGAGCTGATTTTTGATATAGATATGACAGATTACGATGATGTTAGATACTGCTGCTCTGGTGCTGATGTTTGCTTGAATTGCTGGCCATTGATGACTATAGCTATCAAAGTGATTGATACTGCCTTAAGAGATGACTTTGGTTTTAAACACATTCTCTGGGTTTATAGTGGCCGACGGGGTGTTCATTGTTGGGTCTGTGATGGGAAGGCAAGAAGGTTAACTAATGAGCAGAGAGCAGCTATTGCTGACTATTTTCGTGTCTACAAGGGCAATGAAAATAGTCATAAGAAGGTTTCTTTGACGGGTCATTCTCTTCATCCTTTCCTGCTGAGATCATACACCGAAGTTCTGAAGGACTTTTTTGAAACGATACTGCTAACGAGTCAAAACATACTTTCTACTGAGGAGAGATATGAGAAGATCCTAGAGATGATTCCAGACGCATCTATTACTTCTGACCTTAGGGGCAGGTGGCAAGAGAATAAGCATTCCTCTAGTGCAAAAGGAGACATTAATGTTGTTCGATGGGAGCAGCTCAAACAGTTGCTGCAATCAGGAAAATATAAGGCACAAGGGACGCGTAGGTGTGTCGAAGAGATTGTGTTCTCCTTTACTTACCCTAGACTAGATATGGAGGTTTCAAAGCATATGAATCATTTGCTTAAAGCGCCATTCTGTGTACACCCAAAAACAGGTCGTATTTGTGTCCCTATTGATCCAAATCAATGTGAGCAGTTTGATCCTACCACAGTACCGACCCTTTCACAGCTATTAGAAGAACTTAACGAAAACGGTTTGAGAGCTGATGTTGATGGTGAATGGGATAGGACTTCACTTGGAAATGCCATCCGCCTTTTCAGATCGTCATTCTTACAGCCCCTACTAAAGGCTAGCAAGGAGGAGATAGAAAGTTCCTATAATGCAAAATTGCAGCAGTCGAAGAATTCCCTTAGCTGGTAG 1380 0.4275 MTREEFQNGRDDMLIDGCEAEVPEQMQGSAVPIEFNSNYLKVYYGKLFPYADVFRWMSYGNDAKHPACDPSYFGRREFSFTLENDIYLRFQSFNSAAELENSIKEKCPLKIDIGPVYSVDPAKRHAYAQSGDNVFTPVERELIFDIDMTDYDDVRYCCSGADVCLNCWPLMTIAIKVIDTALRDDFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRAAIADYFRVYKGNENSHKKVSLTGHSLHPFLLRSYTEVLKDFFETILLTSQNILSTEERYEKILEMIPDASITSDLRGRWQENKHSSSAKGDINVVRWEQLKQLLQSGKYKAQGTRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRICVPIDPNQCEQFDPTTVPTLSQLLEELNENGLRADVDGEWDRTSLGNAIRLFRSSFLQPLLKASKEEIESSYNAKLQQSKNSLSW 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0019 459 CDD AE_Prim_S 64 388 IPR014052 GO:0003896|GO:0006269
Glsi09g0019 459 PANTHER DNA PRIMASE SMALL SUBUNIT 26 444 - -
Glsi09g0019 459 Gene3D DNA primase, PRIM domain 28 440 - -
Glsi09g0019 459 Pfam DNA primase small subunit 144 379 IPR002755 GO:0003896|GO:0006269
Glsi09g0019 459 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 41 399 IPR014052 GO:0003896|GO:0006269
Glsi09g0019 459 SUPERFAMILY Prim-pol domain 35 404 - -
Glsi09g0019 459 FunFam DNA primase 27 440 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0019 1 459 Core DNA Replication Machinery Family AT5G41880 65.870 0.0 647