Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2855 ATGGAGACAGAAGGTAAGTCTCTTGGTGCAAGCAAATCTTGTGGTGCAGGCAAATCTCGTGGTGTAGGCAAGTCTCGTGGTGCAGAGGAGAAGTATCCAACACAGAGAGAAATAGAAGACTATGCTGCTGCTTTCGAATTGACAGACAAGCAAGTTCAAGATTGGTTTATTGAGAATAGGAGGAGGGAGAAGAGACATTCAAAGCATTAG 210 0.4429 METEGKSLGASKSCGAGKSRGVGKSRGAEEKYPTQREIEDYAAAFELTDKQVQDWFIENRRREKRHSKH 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2855 69 ProSiteProfiles 'Homeobox' domain profile. 29 66 IPR001356 GO:0003677
Glsi08g2855 69 SUPERFAMILY Homeodomain-like 29 67 IPR009057 -
Glsi08g2855 69 CDD homeodomain 31 67 IPR001356 GO:0003677
Glsi08g2855 69 Gene3D - 25 69 - -
Glsi08g2855 69 MobiDBLite consensus disorder prediction 1 35 - -
Glsi08g2855 69 Pfam Homeodomain 29 65 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2855 Glsi-ChrGlsi08 65162141 65166709 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Glsi08g2855 Homeodomain 1.1e-06 CL0123