Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2853 ATGTCTTCCTCATCTTCTCCTTCATCGTCATCATCACCATCTTCGCCTTCAACCCAAGATGACACTGGCAATGGTGGTGCTGATCCTGGCCCTAGTACTAGAAGAGCCCGCAATTTGGAAGGGTCATCTTCATCTCGCCGACGTGCTCTGAATGAGGTTTTGCCTGAACCATTGCTGGAAGCTTTAGCCACTCAAGTTGCCATTGAAGCTGCTCGTTCCGATGGACACCTCGCTGCTGCTCCTGCCCTTTCCAATATATTTCAGGTTTGTTCAGCATGGCAAGCTATCTCCCGCTCGGATCCCCTGTGGCAACGACTTACAAGCCGTATTTGGCATGGCTCCTATCGGCTACGCGGCACATGGCATGAAGAGTTCATCTACTGGCATCGAACGGCTAGAAACTACATCACAGGCAGATACGTGTACACCTCTCCGCACTATAATCCATTCCAGTTGGACTTACACCCTCACACCTTACTCTGCCGGTGCCTCACGCTCACCAACTTTCACCTCGCTTGTGGCTTCGCCGACGGCACCGTACGACTCTTCGACCTCGAAACCCGTTCCCACGTCAGCACCTTCCGGTCCCACCACGATGTCCTATTTGGCCCTTTCTCAAGATCCGTGTCCGGAATAGTGATCACCAACTCCACGCTGGTGTTTGCCACGCTCGACGGAAACATATACGTGGCCGTCATCAACGGGCCGCCCGAGACCCGAAGGGTCAGTTCCGGTGACGTGTACAACAACGGCGTCTTAGTGGAGTTCGCCGGCTGCGGCCGGTGGTGGGTGGGCCTCTTCTCCGGCGTTCCTCTTCAGGCATTCCGGGTCTGGGAGGCCCACAACGAACTACCCGTTTACATCGGCGGATCCCTGACCGATCCAGAGTCCCTCCTTGGCTGGCACATGTTGACCGAGTTAACCGAACCGGTGGGTCGCCTTCGTGTCACACCAAGGGAACTGGTCGTGGCGTGCACACGTTCACGACTCATAGTGTTTGACTTGAGGAGTCCGGGGATTGTATTGCATGAGCTAGTATCCAGAGTAGGCTTCATTGTGACCTCGCTTGACATAAGCCACGAGGCATTTGTTATCGTGGACAGGAGAGGTCGAGCTAGGGTGCGCCGTGCGAGTACGTTTGAGTCGCTCTGTGAATTTTTGGTGATAGGAGCATCACCAAGGGGTCTGACCGGGAGCATGAACTCGGGGTATGCACTAATGTACGCTGGTCGTGTTATAACAGTGTGGGACATAGGACGCCGGGAAGGACGACAATGTTTGACTTTTGCAGAAAGAATAGAGGAGGGCAACGCCATGGTCGCCAATGAGAGACACGTGGCATTGTCTTCTGACGATATCTCGATACACCTGTGGGATTTTGGTGCACAGTAG 1392 0.5431 MSSSSSPSSSSSPSSPSTQDDTGNGGADPGPSTRRARNLEGSSSSRRRALNEVLPEPLLEALATQVAIEAARSDGHLAAAPALSNIFQVCSAWQAISRSDPLWQRLTSRIWHGSYRLRGTWHEEFIYWHRTARNYITGRYVYTSPHYNPFQLDLHPHTLLCRCLTLTNFHLACGFADGTVRLFDLETRSHVSTFRSHHDVLFGPFSRSVSGIVITNSTLVFATLDGNIYVAVINGPPETRRVSSGDVYNNGVLVEFAGCGRWWVGLFSGVPLQAFRVWEAHNELPVYIGGSLTDPESLLGWHMLTELTEPVGRLRVTPRELVVACTRSRLIVFDLRSPGIVLHELVSRVGFIVTSLDISHEAFVIVDRRGRARVRRASTFESLCEFLVIGASPRGLTGSMNSGYALMYAGRVITVWDIGRREGRQCLTFAERIEEGNAMVANERHVALSSDDISIHLWDFGAQ 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2853 463 MobiDBLite consensus disorder prediction 1 26 - -
Glsi08g2853 463 MobiDBLite consensus disorder prediction 1 47 - -
Glsi08g2853 463 SUPERFAMILY F-box domain 83 132 IPR036047 GO:0005515
Glsi08g2853 463 PANTHER WD40 REPEAT PROTEIN 12, 37 9 437 - -
Glsi08g2853 463 SUPERFAMILY WD40 repeat-like 149 460 IPR036322 GO:0005515
Glsi08g2853 463 Gene3D - 266 463 IPR015943 GO:0005515
Glsi08g2853 463 Gene3D - 104 254 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2853 Glsi-ChrGlsi08 64630148 64637644 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Glsi08g2853 None None None