Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2850 ATGACTTCCATTGGCCAAAACCAGTGTATTCTATCTTTATTGTTGAAAAACCTTAAAGACAAGGAGACTGCAAGCTACAATTCTTATGCACTATATGCTTATGATTTGGTTTGGTTAACAGCCCGTGCTCTTGATGTTTTTCTTAATAAAGGCGGAAATATATCTTTCTCTAGTGACCCCATATTGCATGACACAAATGGAAGTATGTTGCATTTAGCATCCCTTCGTACTTTTGATGGTGGCCCACTATTTCTCTACAAAATCTTGAGAATGAACTTCACTGGTCTAAGTGGTCAAATTAAATTTGATGTGGACAAGAATTTAATTCATCTAGCATATGATATTCTAAACATTAGTGAAGCTACCCGTAGAATAGGTTATTGGTCTAATTACTTAGCTCTGTCAATTGTAGCACTTGAAATTTTATATGCAAAGCCTCTTAACACTTTAATTAGCAATCAACATCTTTACAGTGTGATATGGCCAAGAGAGACTACAACTAAACCTAGGGGATGGGTATTCCCCAATAATGGAAAGCCACTATGA 546 0.359 MTSIGQNQCILSLLLKNLKDKETASYNSYALYAYDLVWLTARALDVFLNKGGNISFSSDPILHDTNGSMLHLASLRTFDGGPLFLYKILRMNFTGLSGQIKFDVDKNLIHLAYDILNISEATRRIGYWSNYLALSIVALEILYAKPLNTLISNQHLYSVIWPRETTTKPRGWVFPNNGKPL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2850 181 Pfam Receptor family ligand binding region 21 119 IPR001828 -
Glsi08g2850 181 Gene3D - 16 110 - -
Glsi08g2850 181 SUPERFAMILY Periplasmic binding protein-like I 25 173 IPR028082 -
Glsi08g2850 181 Gene3D - 111 130 - -
Glsi08g2850 181 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 21 179 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2850 Glsi-ChrGlsi08 62734800 62736061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2850 16 181 Ion Channels AT2G32390 54.386 2.88e-56 186