Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2824 ATGCAGAGCTCCAACTGCAGACCACCCAAACCGTCATTTTTTTTTTCGTTCGGGAGTAATATGGAAGTCACTAGCACCTACAATGGCAGTAGCATGATGTGGTTTTTTAAGGATAGAGGATTTGATGATAAAAGCATACAAGGAATCTTCACAAAGTGTAGGCGCCTTGAGGGTGTGCATCAAGAAAGAGCATCTGAGAATTGGGCTTATTTGAGAAGCATTGGAATTCAAGAGAGGAAACTCCCATCTATTGTTTCAAAATGTCCCAAGATTCTTATGCTCGGTCTTAATGAGAAGATTTTGCCCATGGTCCAGTGCCTCGAGACATTAGGAACAAAACCTAAGGAAGTTGCTACTGCCATTGCCAAGTTTCCTCATTTACTGTCACATAGTGTGGAAGAGAAGCTTTGTCCACTTTTGGCCTTCTTTCAGGCATTGGGCATCCCTGACAAGCAACTTGGAAAAATGATACTAGTAAACCCAAGGCTTATCAGCTACAGCATTGAAACAAAGTTGACAGAACTTGTGGACTTCCTTGCTAGCCTTGGTCTCAATAAAGATGGAATGATAGGAAAAGTTTTAGCTAGGAACCCATTTATTATGGGTTATAGCATCAATAAAAGGCTCCGCCCTACTTCACAGTTTCTGAAGTTAATAGGTCTGACTGAGCTAGAACTTCAATTGGTGGCTGTGAACTTCCCAGAAGTCTTGAGTAGAGATGTGAACAAGGTTTTGGCACCCAATTATGCTTATTTAAAGAAATGTGGATTTCAAGACAGACAGATAGCTGCTTTGGTGGTTGGATTTCCTCCAATCCTGATCAAGAGCATCCATAATTCTTTAGAACCAAAGATAAGGTTTTTAGTAGATGTGATGGGGAGACAAATCAATGAAGTTGTTGATTATCCTTGTTTCTTTCGTCATGGTCTGAAGAGAAGATTAGAGCTGCGGTACAAACTTTTAAAGCAAAGGAACTTAAATTGTAGCTTGAGTGAAATGCTCGACTGTAATGAGAAGAAGTTCTTCTTAAAGTTTGGTTTATTAGAAGGATATGCCATGAGTAGCCAGGTGTCATTCCAATTATAA 1086 0.3996 MQSSNCRPPKPSFFFSFGSNMEVTSTYNGSSMMWFFKDRGFDDKSIQGIFTKCRRLEGVHQERASENWAYLRSIGIQERKLPSIVSKCPKILMLGLNEKILPMVQCLETLGTKPKEVATAIAKFPHLLSHSVEEKLCPLLAFFQALGIPDKQLGKMILVNPRLISYSIETKLTELVDFLASLGLNKDGMIGKVLARNPFIMGYSINKRLRPTSQFLKLIGLTELELQLVAVNFPEVLSRDVNKVLAPNYAYLKKCGFQDRQIAALVVGFPPILIKSIHNSLEPKIRFLVDVMGRQINEVVDYPCFFRHGLKRRLELRYKLLKQRNLNCSLSEMLDCNEKKFFLKFGLLEGYAMSSQVSFQL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2824 361 PANTHER CGI-12 PROTEIN-RELATED 152 273 IPR003690 GO:0003690|GO:0006355
Glsi08g2824 361 Gene3D Transcription termination factor 3, mitochondrial 124 349 IPR038538 -
Glsi08g2824 361 SMART mt_12 296 327 IPR003690 GO:0003690|GO:0006355
Glsi08g2824 361 SMART mt_12 263 295 IPR003690 GO:0003690|GO:0006355
Glsi08g2824 361 SMART mt_12 118 149 IPR003690 GO:0003690|GO:0006355
Glsi08g2824 361 SMART mt_12 227 258 IPR003690 GO:0003690|GO:0006355
Glsi08g2824 361 SMART mt_12 82 113 IPR003690 GO:0003690|GO:0006355
Glsi08g2824 361 SMART mt_12 47 77 IPR003690 GO:0003690|GO:0006355
Glsi08g2824 361 SMART mt_12 154 185 IPR003690 GO:0003690|GO:0006355
Glsi08g2824 361 SMART mt_12 191 222 IPR003690 GO:0003690|GO:0006355
Glsi08g2824 361 FunFam transcription termination factor MTERF6, chloroplastic/mitochondrial 117 349 - -
Glsi08g2824 361 Pfam mTERF 116 341 IPR003690 GO:0003690|GO:0006355
Glsi08g2824 361 Pfam mTERF 35 143 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi08g2824 mTERF 2.2e-59 No_clan