Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2785 ATGAAAGTGCCCTTGACGTGCTTCACCGACCACTCCAATTCCACTGTCTCAACTCCAAGCATGGCGGCGATGGAGGAGAAAAATGAAGAAGGAACTGATGACGTAACTAGCAAAGGACGAGATCTAAAGAAGGCAATAAGAAAAAGGGCCGAGAATATATGCTACGGGGCTATGGGTGGGAAATGGGGTTGTGAAAGTCCGCCTGACCCACAGTTTGTTGTGATATTATCTGAATCCATGCATATGTTGTGTGTGGAAGCTTTGGATACTATTCAACATGTTAGAGCTGTTCTTGCAATGAAAAAGACTTGTGAACTATATGTGGAGAATGGCTCCCTTGCAAATATTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCATTGGTTGCTGTTTATATTGCCCAGGTATTGGAAGGCTTGGTTTATCTACATGAACAAGGTGTAATCCATCGGGATATTAAGGGTGCAAACATACTGACAACCAAAGAGGGTCTTGTCAAACTTGCTGATTTTGGTGTAGCAACGAAATTGACTGAGGCCGATGTTAATACTCATTCAGTTGTTGGAACACCATATTGGATGGCTCCAGAGGTTATAGAAATGTCTGGGGTTTGTGCTGCTTCTGACATTTGGAGTGTTGGCTGTACGGTTATTGAACTTCTTACATGTGTTCCTCCTTATTATGATCTGCAGCCTATGCCAGCTCTCTTTCGTATTGTTCAGGATGAACATCCTCCAATTCCTGATAGCCTGTCTCCTGACATCACTGATTTTCTGCGCCAGTGCTTTAAGAAGGTAGGATCTTTACTCCTCAGTTCGAAAAAGTTCCTTAATGTATGGGATGTTTTAGCAAGGATTTCATTCTTGCTGCGTATTACTTTATTTATTTTATTCTAA 900 0.4156 MKVPLTCFTDHSNSTVSTPSMAAMEEKNEEGTDDVTSKGRDLKKAIRKRAENICYGAMGGKWGCESPPDPQFVVILSESMHMLCVEALDTIQHVRAVLAMKKTCELYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLRQCFKKVGSLLLSSKKFLNVWDVLARISFLLRITLFILF 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2785 299 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Glsi08g2785 299 SUPERFAMILY Protein kinase-like (PK-like) 107 267 IPR011009 -
Glsi08g2785 299 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 107 266 - -
Glsi08g2785 299 SMART serkin_6 47 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2785 299 MobiDBLite consensus disorder prediction 7 22 - -
Glsi08g2785 299 Pfam Protein kinase domain 76 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2785 299 Gene3D Transferase(Phosphotransferase) domain 1 71 285 - -
Glsi08g2785 299 ProSiteProfiles Protein kinase domain profile. 22 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2785 299 MobiDBLite consensus disorder prediction 26 40 - -
Glsi08g2785 299 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2785 Glsi-ChrGlsi08 47579751 47587981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2785 50 266 MAP Kinase Kinase Kinase AT3G13530 73.191 1.95e-108 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Glsi08g2785 Pkinase 8.8e-43 CL0016