Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2781 ATGCAAGCATCAGAACATCATAGAAGTTCAAGCATGTCCTATGAACCAATGCAACAAACTGAGGCCTACTGCTTGCCGCAGTATCGAACTTTAAATCATCAGCTATACTACAATGATGGAAGTCATGGACCCCACTTCTTGAATCCAAGTTCTTCTGAACTTTACTACACGTTGGAGTCCTCCTCTGCAACTGGAAGTTTCACTCTTTACAACTCCCCTTCGACTGTCAGTTTCTCACCCAATGGTAGCCCAATATCACAGCAGGATTCTCATTCATACTCATACCCACCTGATCATCATCATTCCCCAGACAATACTTATGGCTCTCCTATGAGCGGATCCTGCATAACTGATGATTTAAATTGCTTCAAGCACAAGTTGAGAGAGTTGGAAAGTGTAATGTTTGGCCCTGAGTCTGATAATCTTGACAGCTATGACAGTACCTTCAAGGATGTAACAAACATTGTCCCACCTGAGATGGACAGCTGGAGACAAACTATGATGGCAATTTCTAGTAGGGACCTAAAACAGGTCCTAGTTGCATGTGCAAAAGCAGTTGCAGATAATGATTTGTTAATGGCTCAATGGTTGATGGACGAATTACGGCAGATGGTGTCAGTTTCTGGCGAACCAATTCAAAGGTTGGGTGCATATATGTTGGAAGGGCTTGTGGCACGATTGTCTGCATCTGGGAGTTCAATCTACAAAGCATTGAGATGCACAGAACCAGAAAGTGCTGAGCTTCTCTCGTACATGCACATACTTTATGAGGTTTGTCCCTACTTCAAATTTGGGTACATGTCTGCGAATGGAGCCATTGCTGAAGCTATGAAAGATGAAGACAGAGTTCATATTATTGATTTCCAAATTGCTCAAGGAAGTCAATGGATCACTTTAATCCAGGCTTTTGCAGCTAGGCCTGGGGGACCACCCCACATCCGGATAACCGGTATTGATGATTCAACATCAGCTTATGCCCGTGGAGGAGGACTAAATATAGTCGGAAAGAGGCTATCTAAGCTTGCTGAGAAATTTAAGGTGCCATTTGAATTTCATGCTGCAGCTATCTCTGGCTGTGATGTTCAACTGCATAATCTTGGAGTTCAATCAGGGGAATCCCTGGCTGTGAATTTTGCATTCATGCTGCATCACATGCCTGATGAAAGTGTCAGCACTCAGAATCACAGGGACAGACTTTTGCGCTTGGTGAAGAGCTTGTCTCCAAAGGTGGTGACGCTTGTTGAGCAAGAATCTAACACAAACACTGCTCCATTCTTTCCACGTTTCCTTGAAACTCTGGATTATTACACAGCTATGTTTGAGTCAATAGATGTGACACTTCCCAGAGAGCATAAAGAGCGAATAAATGTTGAGCAGCATTGCTTGGCAAGGGACGTTGTTAACATTATAGCTTGTGAAGGGGTTGAGAGAGTGGAACGGCATGAGGTCCTTGGGAAGTGGAGGTCAAGATTTGCAATGGCTGGTTTCACCCCTTACCCTTTGAGCTCTTTGGTAAATGGTACCATTAAGAAATTGATTGAGAACTACAGCGATAGATATAGACTTGAAGAGAGAGATGGAGCTCTTTATCTTGGTTGGATGAATAGAGATTTGATTGCTTCCTGCGCATGGAAGTGA 1638 0.4353 MQASEHHRSSSMSYEPMQQTEAYCLPQYRTLNHQLYYNDGSHGPHFLNPSSSELYYTLESSSATGSFTLYNSPSTVSFSPNGSPISQQDSHSYSYPPDHHHSPDNTYGSPMSGSCITDDLNCFKHKLRELESVMFGPESDNLDSYDSTFKDVTNIVPPEMDSWRQTMMAISSRDLKQVLVACAKAVADNDLLMAQWLMDELRQMVSVSGEPIQRLGAYMLEGLVARLSASGSSIYKALRCTEPESAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQIAQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLNIVGKRLSKLAEKFKVPFEFHAAAISGCDVQLHNLGVQSGESLAVNFAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAPFFPRFLETLDYYTAMFESIDVTLPREHKERINVEQHCLARDVVNIIACEGVERVERHEVLGKWRSRFAMAGFTPYPLSSLVNGTIKKLIENYSDRYRLEERDGALYLGWMNRDLIASCAWK 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2781 545 MobiDBLite consensus disorder prediction 78 110 - -
Glsi08g2781 545 ProSiteProfiles GRAS family profile. 166 545 IPR005202 -
Glsi08g2781 545 MobiDBLite consensus disorder prediction 78 93 - -
Glsi08g2781 545 Pfam GRAS domain family 175 545 IPR005202 -
Glsi08g2781 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 139 539 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2781 Glsi-ChrGlsi08 47048639 47050276 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2781 113 545 GRAS Transcription Factor Family AT5G48150 76.765 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi08g2781 GRAS 3.5e-138 CL0063