Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2777 ATGCCGGCTGAGAACTCAAACACTTCTGATCAAGAAGTGGAACCATTTGCTGAAGTTGACCCAACTGGCAGGTTTGGGCGATACAGCGATCTGCTTGGCAGTGGTGCTGTGAAAAAGGTTTACAGGGCCTTTGATCAAGAGGAAGGCATCGAGGTGGCCTGGAATCAGGTTCGACTGAGGAATTTCAGTGAAGACCCTGTGCTGTTAAATCGTCTTCGTTCTGAGGTTGAGCTGCTTAGTACATTGAAGAACAAATATATCATTGTTTGTTACAGTGTCTGGAAAGATGATGAGCGGAATACTTTAAATTTTATTACTGAGGTATGTACTTCTGGAAATCTGAGGGCTTACAGGAAGAAGCATAGACATGTGTCCATTAAGGCATTGAAAAAGTGGTCAAAACAGGTCCTTGAGGGATTGGAGTATCTTCATACGCATGATCCATGCATCATTCACAGAGATCTCAATTGCAGTAACCTCTTCATCAATGGGAATATTGGCCAGGTAAAAATTGGTGATCTCGGATTGGCTGCAATTGTGGGAAAGAGCCATGCAGCACATTCAATTATTGGGACGCCAGAGTATATGGCTCCTGAGCTGTATGAAGAAGATTATACGGAGTTGGTTGACATATACTCTTTTGGAATGTGTTTACTTGAGATGGTTACCATGGAGATACCCTATTGTGAATGTGACAGTGTTGCCAAGATATACAAAAAGGTCACAACAGGAATATTGCCTCAGTCTTTGACCAAGGTTAGAGATCCCGAGGTGAAGGAATTCATTGAGAAATGCATATCACAGCCAAGGGCAAGACCTTCAGCCACAGATCTCCTCAAGGATCCTTTCTTTTCTGAACTCAACAATGACGAAGAACCAGAACCAACCAGTTAA 894 0.4295 MPAENSNTSDQEVEPFAEVDPTGRFGRYSDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLRNFSEDPVLLNRLRSEVELLSTLKNKYIIVCYSVWKDDERNTLNFITEVCTSGNLRAYRKKHRHVSIKALKKWSKQVLEGLEYLHTHDPCIIHRDLNCSNLFINGNIGQVKIGDLGLAAIVGKSHAAHSIIGTPEYMAPELYEEDYTELVDIYSFGMCLLEMVTMEIPYCECDSVAKIYKKVTTGILPQSLTKVRDPEVKEFIEKCISQPRARPSATDLLKDPFFSELNNDEEPEPTS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2777 297 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2777 297 Gene3D Phosphorylase Kinase; domain 1 9 107 - -
Glsi08g2777 297 FunFam probable serine/threonine-protein kinase WNK9 109 290 - -
Glsi08g2777 297 FunFam Probable serine/threonine-protein kinase WNK1 10 107 - -
Glsi08g2777 297 CDD STKc_WNK 24 284 - -
Glsi08g2777 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 287 - -
Glsi08g2777 297 SUPERFAMILY Protein kinase-like (PK-like) 20 284 IPR011009 -
Glsi08g2777 297 MobiDBLite consensus disorder prediction 273 297 - -
Glsi08g2777 297 Gene3D Transferase(Phosphotransferase) domain 1 109 290 - -
Glsi08g2777 297 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2777 Glsi-ChrGlsi08 46660120 46661501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2777 4 284 MAP Kinase Kinase Kinase AT5G55560 75.445 1.66e-168 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Glsi08g2777 Pkinase 7.6e-51 CL0016