Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2769 ATGGCCACCTCCGCTATCCAACAATCAGCATTTGCTGGCCAAACAGCTTTGAAGCAGACAAATGAGCTCGTCCGAAAGGCTGGTGGCTTCGGCAATGGCCGCTTTACCATGCGCCGGACCGTGAAGAGTGCTCCCCAAAGTATTTGGTACGGCCCTGACCGTCCCAAGTACTTGGGTCCCTTCTCCGACCAAATTCCATCATACCTGACTGGTGAATTTCCTGGCGACTACGGATGGGACACTGCTGGGTTATCAGCAGACCCCGAGACCTTTGCCAGGAACCGTGAGCTAGAGGTAATTCACAGCAGATGGGCCATGCTTGGTGCATTGGGATGTGTCTTCCCTGAAATCCTTGAAAAGAATGGTGTCAAGTTTGGTGAGGCAGTGTGGTTCAAGGCTGGTGCCCAGATATTTTCCGAGGGGGGCCTTGATTATCTTGGCAACCCAAACTTCATTCACGCTCAGAGCATCCTTGCAATCTGGGCTGTTCAGGTTGTGCTCATGGGATTTGTTGAAGGCTATAGGGTTGGGGGAGGACCACTTGGTGAAGGACTAGACCCAATTTACCCTGGTGGTGCCTTTGACCCACTTGGTCTGGCTGATGACCCTGATGCATTTGCAGAGTTGAAGGTGAAAGAACTCAAGAATGGCCGATTGGCAATGTTCTCCATGTTTGGATTCTTTGTTCAGGCCATTGTTACCGGCAAGGGCCCTATTCAGAACCTTTTTGACCATGTTGCCGACCCTGTTGCCAACAATGCTTGGGCTTACGCTACTAACTTTGTCCCTGGACGATGA 798 0.515 MATSAIQQSAFAGQTALKQTNELVRKAGGFGNGRFTMRRTVKSAPQSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNFIHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLFDHVADPVANNAWAYATNFVPGR 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2769 265 Pfam Chlorophyll A-B binding protein 66 231 IPR022796 -
Glsi08g2769 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Glsi08g2769 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 264 IPR001344 GO:0009765|GO:0016020
Glsi08g2769 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Glsi08g2769 265 FunFam Chlorophyll a-b binding protein, chloroplastic 56 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2769 Glsi-ChrGlsi08 45535671 45537201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2769 1 265 Chloroplast and Mitochondria Gene Families AT2G05070 87.547 1.98e-179 492