Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2747 ATGAAATTGGTAGGGTCTGTGTCGGAGGCATTAGTGGTTCAACTTAAGGAGGTTAACGTACATGGAACAATAGTATGTGTTTCTCAAACTTTCTGGATCCAAAGTGGGACAATTCGTAATAACATATTCTTTGAAAGGTCATTGGAAGAAACTAAATACCAAAGTACCATTAAGGCATGTGCTTTGAATAAGGATATAACTGGTTTTAGCCATGGTGATCTTACAGAAATAGGTCAGAGAGGCATTAACTTGAGTGGAGGACAAAGGCAGAGGATTCAACTTGCCCGAGCTCTCTATGATGATGCTGATGTATATATTCTTGATGACCCTTTCAGTGCGGTAGATGCACATACTGCTGCAGTTCTGTTTCATGTAAGAAGAACACCTTAA 390 0.3949 MKLVGSVSEALVVQLKEVNVHGTIVCVSQTFWIQSGTIRNNIFFERSLEETKYQSTIKACALNKDITGFSHGDLTEIGQRGINLSGGQRQRIQLARALYDDADVYILDDPFSAVDAHTAAVLFHVRRTP 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2747 129 Pfam ABC transporter 19 111 IPR003439 GO:0005524
Glsi08g2747 129 FunFam Multidrug resistance associated protein, putative 48 116 - -
Glsi08g2747 129 Gene3D - 3 128 IPR027417 -
Glsi08g2747 129 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 124 IPR027417 -
Glsi08g2747 129 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 10 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2747 Glsi-ChrGlsi08 38150733 38151712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2747 15 118 Calmodulin-binding Proteins AT2G36910 38.679 3.22e-12 60.5