Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2744 ATGGATAACCTTGTCGCGCAGGTCATAGCTTCAGTTTTAAGAGTTAAATTTTGGATTGGTTTGTGTTCTTACATGGAAGCAAAGAAAGAGGAGGCTCTTAAAGCAATAGAAATTGCTGAGAAGCGATTTGCTCATAGAGATTTTGCAGGTGCAAAAAATTATGCATTAAAGGCTAAAACCCTTTGTCCACGATTGGAGGGTATATCTCAAATGTTGGCCACATTTGAAGTTTATGTGTCCTCTGAGGTTAAATATAATGGCGAAAGAGATTATTATTCAATTCTTGGATTAAAACCTTCTGCAGATGAAGAGAACATCAAGAAACAGTACAGGAAGATGGCTGTGTTGCTTCACCCTGATAAAAACAAATGTGTCGGGGCTGATGGGGCATTTAAGCTTGTATCTGAGGCATGGACATGGCTGTCAGATAATGCTAAGCGTAGTTCTTATGATCTCAATAGAAATGCCCAACTGGCTCCTGGGATTAATCAGACAAATTTTTCTTCAGTCCATGCTACAGGTTATAATTATAGTAAATATTCCAATTTTTCAACCTCTCATGGTAGGTCTGACACTTTCTGGACCATTTGCACTTCTTGTAAAGTTCAGTATGAGTATCTACGCAAGTATATGAATAAGAGACTTTCATGCAAGAACTGCCGTGGCACTTTCATTGCAGTTGAAACTGGGGCAGCCCCTGCAAATGGTTCGTTCCCATATTGTCCTTGGTCATATGTGCCAAGCAATGGGTATGGAAGCCATTCATTTGATGGAGTTACATATGTCCCAACTAGTGCTACCTATTTTAATGGCAATGGGGTCACAGGATACCATTCTGGACATGGATATGAGTATGTTCCAAGCATTTCATTTCAGTGGAGCTCTGCCAGCCATGTCAGTCAAAATGGATCAACTGCCTTATCTGCTGGTTCTGTTTATCAGGCCAATGGAAATGTGAAGAGAGGAAGACCGAAAGTGAAATCAGGAGTTGATAGGAGTCACTACATGGGAGAGACTGTTCTCAATATAAATTCGGATGTGTTATTCTCCAGTTATGATCCCCAGGAAATTAAGCCCAGTAAACCTGATAAGAAAAGAAAAGTTGTTATGGAAGCTGATTTCAGAAATAATTATGAAGAAAATGGATCAAAAGTTTCTCTGGAATCAAGATTGACCAATGGAAATGAAAGCATTGGACAAAGCCAGAAGCTTTCCTGTGCAAATGAAGTTCAAACTAAGCAGTGTCCCATGGAACCAGTATTTGATGCTAGAAAGTTATTGATTGAGAAGGCCAGAACAGAAATAAGGAAGAAATTGAAAGAGATGAAGTTGGCATCTGAAAATGCTGCTACTGTTAAGGAGAAAGAAAAAGCACAACCTGATGTCAGTCTAGTCAAAAGAGAAACATATAGAAGAGTGGGTCTGAATATTTCTGTTCATCAACTACAGCATAGCAAAACTGATCCAGTCTCAATAACGGTCCCAGATCCTGACATTCATGACTTTGATAAAGATAGGTCAGAGGAATGCTTCAGGGCAAAGCAAATATGGGCCTTATATGATGAGGAGGATGGAATGCCTCGTTTGTATTGTCTGATCCGTGAGGTGATCTCTGTCAATCCATTTAAGGTTGATATTAGCTACTTGAGCTCCAAAACTGATAGTGAGTTTGGCACAGTGAATTGGTTAGATTCAGGTTTTACTAAATCCTGTGGGAATTTTAGGGCCCGGAACTCTGATATTGTTGACCAAGTCAACATTTTTTCTCATGTTCTAAGCCGTGAGAAGGCTGGTCGAGGTGGTTGTGTTCGTATATATCCTAGAATTGGAGATATTTGGGCTGTTTATCGAAATTGGTCACCAGATTGGAACAGACATACTCCAGATGAAGTAAGACATCAATATGAAATGGTGGAGGTTCTTGATGAATACTTGGAGGAGCTTGGTGTTTGTGTTACTCCCCTTATAAAGTTGGCTGGCTTTAAAACAGTATATCAGAGGAATACAGACAAAAGTGCCATTAGATGGATTCCAAGAAGAGAAATGTTGCGCTTTTCACACCAAGTGCCATCTTGGTTGCTGAAGGGAGAAGCTAGCAATTTGCCAGAAAGGTGTTGGGACCTGGATCCAGCTGCAACTCCAGATGAACTTCTTCATGCTGCTACAGAAGCATACGCTTTGTAG 2184 0.4025 MDNLVAQVIASVLRVKFWIGLCSYMEAKKEEALKAIEIAEKRFAHRDFAGAKNYALKAKTLCPRLEGISQMLATFEVYVSSEVKYNGERDYYSILGLKPSADEENIKKQYRKMAVLLHPDKNKCVGADGAFKLVSEAWTWLSDNAKRSSYDLNRNAQLAPGINQTNFSSVHATGYNYSKYSNFSTSHGRSDTFWTICTSCKVQYEYLRKYMNKRLSCKNCRGTFIAVETGAAPANGSFPYCPWSYVPSNGYGSHSFDGVTYVPTSATYFNGNGVTGYHSGHGYEYVPSISFQWSSASHVSQNGSTALSAGSVYQANGNVKRGRPKVKSGVDRSHYMGETVLNINSDVLFSSYDPQEIKPSKPDKKRKVVMEADFRNNYEENGSKVSLESRLTNGNESIGQSQKLSCANEVQTKQCPMEPVFDARKLLIEKARTEIRKKLKEMKLASENAATVKEKEKAQPDVSLVKRETYRRVGLNISVHQLQHSKTDPVSITVPDPDIHDFDKDRSEECFRAKQIWALYDEEDGMPRLYCLIREVISVNPFKVDISYLSSKTDSEFGTVNWLDSGFTKSCGNFRARNSDIVDQVNIFSHVLSREKAGRGGCVRIYPRIGDIWAVYRNWSPDWNRHTPDEVRHQYEMVEVLDEYLEELGVCVTPLIKLAGFKTVYQRNTDKSAIRWIPRREMLRFSHQVPSWLLKGEASNLPERCWDLDPAATPDELLHAATEAYAL 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2744 727 SMART dnaj_3 89 146 IPR001623 -
Glsi08g2744 727 ProSiteProfiles dnaJ domain profile. 90 154 IPR001623 -
Glsi08g2744 727 PANTHER BNAC03G44070D PROTEIN 25 714 - -
Glsi08g2744 727 SUPERFAMILY Chaperone J-domain 85 167 IPR036869 -
Glsi08g2744 727 CDD DnaJ 90 143 IPR001623 -
Glsi08g2744 727 Pfam DnaJ domain 90 151 IPR001623 -
Glsi08g2744 727 Pfam Domain of unknown function (DUF3444) 491 697 IPR024593 -
Glsi08g2744 727 Gene3D DnaJ domain 87 199 IPR036869 -
Glsi08g2744 727 PRINTS DnaJ domain signature 126 146 IPR001623 -
Glsi08g2744 727 PRINTS DnaJ domain signature 92 110 IPR001623 -
Glsi08g2744 727 PRINTS DnaJ domain signature 110 125 IPR001623 -
Glsi08g2744 727 PRINTS DnaJ domain signature 146 165 IPR001623 -
Glsi08g2744 727 Coils Coil 428 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2744 Glsi-ChrGlsi08 37412874 37415057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2744 29 325 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.875 6.31e-34 131