Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2697 ATGATTGCCCATTTCAATCAAAATCACCTGAGTCTTTCCTCTCACGCTATATGTCAAAAACCCATTGCACCACAATACCCTTTTTCAGTCTCAATTAAAATCCGAAGCTTTCGCAGTTCTAAGGTTACTCATCGTCCTAAAGTTTATCTGGTGGGTTCTATTCAGTCATCCAATTTGGCGAGTCGGGTTTCTCGGATTGCGAGGACTGAAGCGCAAGATTTGCTCTTAGATTACCTGCATGCTACCCGGAGCTACAGTTTTGTGGATGCTGAGTACATGAGCAAGAATTCGCCACATTTTCTTCAAAGTTTGTTGTCCAGGTTTGATGGCCAGGAAGATGTTGCTCGATCTTTAAAGAAGTTCCTGAGATACAACCCCATTAATGAGTTTGAACCATTTTTTGAGAGTTTGGGTATAAAGACATCTGAGTTAACTTTGTTTCTCCCCCGTGGCATGATGTTTTTGACTGACGATTATGTTATGCTTAACAATTTTCGTGCTTTATGTAATTATGGAGTTCCTCGTAATAGAATGGGTAAAGTGTATAAGGAAGCCAAGGAAATTTTTGGCTTTCGTAGTGGATTATTGTCTTCGAAATTTCAAGCATACGAGGATTTGGGTTTGAGAAGATCGACAGTAATCAAGCTCGTTAGTTGTTGTCCTTCGCTTTTAGTGGGTGATGATAACCGTGAATTTTCCAAGGTTCTTGACTGGTTAAGGAGAATTACGATTCAAAATGATTGGATTGGGAACTACTTGTCGTTTACAAGAACTTATAACTGGAAAGAGATGCTTGATACTGTGGAATTTCTTCATAAAGTGGGATACTCTGAGAAACAAATGCATAATTTGTTTAAGACAAATCCTGCATTATTGTTGGAAGATTCTGTGAAGAAGGTGTATATATTATTAGGTCGATTAATTAAGTTGGCTCTCAAGATGAATGTGATTTATTCTTTTTTTGTACAAAACCCCCACATGTTATCCAGTAAGTGTGCAAAAAATCTGTTGAGAGTGATTGACATTTTGTATAACATTGGAATGGGATCAGAAGACATTGCATACATTGTGTCTAACCACATGCAGCTCCTGAGTTCACATCCCTTGAAAGGCTCAATAACTGTTTGTGGGGAGTTAAAACTTGGCAAAGCTGATTTATGTCAAATAATAAAGGATGATCCGCTGAAATTGATCAGTCTGGCTTCGAAACTGGAACAGAAGAGCACTAAACTGCATTCTCGTATAGATGTAAGTACACATCTGGAGAAAACAACATTTTTGGCAAAACTGGGGTATGTGGAAAACTCAGAGGAGATGGAAAAAGCATTAAAAAGGTTTCGAGGGAGAGGTGATCAGTTACAGGAGAGGTTTGATTGCCTGGTAGAAGCTGGTTTGGACTACAACATTGTGATTGAAATGATAAAACGAGCTCCAATGATCCTGAACCAGACCAAAGGCATAATTGTAAAAAAGATTGACTGCTTAATAAACATTATTGGTTACCCATTAGAAAGTGTGGTGGCATTTCCAGCCTACTTATGCTATGATCTGGACAGAACTAATAAAAGATTTTTAATGAATGCATGGCTTAGGGAAAGAAATGCAGCAAAGCCTATGTTAACCTTGAGCACCATCCTTGCATCCTCTGACCAACGGTTTGTGAAATATTTTGTAGATGTGGATCCAGAAGGTCCAATCATCTGGGAAGGTCTAAAGAATTTTTCAACTTCAACATAA 1737 0.384 MIAHFNQNHLSLSSHAICQKPIAPQYPFSVSIKIRSFRSSKVTHRPKVYLVGSIQSSNLASRVSRIARTEAQDLLLDYLHATRSYSFVDAEYMSKNSPHFLQSLLSRFDGQEDVARSLKKFLRYNPINEFEPFFESLGIKTSELTLFLPRGMMFLTDDYVMLNNFRALCNYGVPRNRMGKVYKEAKEIFGFRSGLLSSKFQAYEDLGLRRSTVIKLVSCCPSLLVGDDNREFSKVLDWLRRITIQNDWIGNYLSFTRTYNWKEMLDTVEFLHKVGYSEKQMHNLFKTNPALLLEDSVKKVYILLGRLIKLALKMNVIYSFFVQNPHMLSSKCAKNLLRVIDILYNIGMGSEDIAYIVSNHMQLLSSHPLKGSITVCGELKLGKADLCQIIKDDPLKLISLASKLEQKSTKLHSRIDVSTHLEKTTFLAKLGYVENSEEMEKALKRFRGRGDQLQERFDCLVEAGLDYNIVIEMIKRAPMILNQTKGIIVKKIDCLINIIGYPLESVVAFPAYLCYDLDRTNKRFLMNAWLRERNAAKPMLTLSTILASSDQRFVKYFVDVDPEGPIIWEGLKNFSTST 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2697 578 Gene3D Transcription termination factor 3, mitochondrial 101 299 IPR038538 -
Glsi08g2697 578 Pfam mTERF 256 365 IPR003690 GO:0003690|GO:0006355
Glsi08g2697 578 Pfam mTERF 373 553 IPR003690 GO:0003690|GO:0006355
Glsi08g2697 578 Gene3D Transcription termination factor 3, mitochondrial 300 564 IPR038538 -
Glsi08g2697 578 Coils Coil 436 456 - -
Glsi08g2697 578 PANTHER CGI-12 PROTEIN-RELATED 73 559 IPR003690 GO:0003690|GO:0006355
Glsi08g2697 578 SMART mt_12 179 209 IPR003690 GO:0003690|GO:0006355
Glsi08g2697 578 SMART mt_12 471 502 IPR003690 GO:0003690|GO:0006355
Glsi08g2697 578 SMART mt_12 503 536 IPR003690 GO:0003690|GO:0006355
Glsi08g2697 578 SMART mt_12 214 245 IPR003690 GO:0003690|GO:0006355
Glsi08g2697 578 SMART mt_12 318 349 IPR003690 GO:0003690|GO:0006355
Glsi08g2697 578 FunFam mTERF family protein 107 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2697 Glsi-ChrGlsi08 30579383 30581119 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi08g2697 mTERF 1.8e-12 No_clan