Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2661 ATGGAGAAAGTAACTGGTATTATGGAAACTATTGAGACGCCATCTTTGCATCCACCATCTCCTGATGCACCGCATAAGACGGAGCCAGAACAGGTTGCCCCTGCTAAGTATTCTATTGTCAGTAGGTGTGAGGTTGGAACTGCAGGGAAACGCATGCCATTACTTGCGAATCACTACAAAGTTTCTGTTAATGTTCCAGATGCAATATTTTTCCAGTATAGTGTTTGTATTACTTCAGAATATGATAGGGCTGTTGAAAGCAAGGGCATTGGGAGAAAACTGATTGACAGGCTTTACCAAACTTACTCTTCTGAACTTGGTGGCAAAAGATTTGCCTATGATGGAGAGAGAACATTGTACACAGTAGGTCCTCTGCCACATAAAAAGTTTGAGTTCATGGTAGTGCTTGAGGAGTCATTTACAAAACGCAGTTCTGGGAGTTCTGGTGCTGATGCAAGCCTCAGTGAGGAAACTAAAAGGTCAAAACATTCTTTTCAGTCAAAGAATTTTAAGGTAGAGATAAGTTTTGCAGCCAAAATACCCCTGCAATCCATTGCCCTTGCCCTCAAAGGAGTTGAGTCAGATTCTAATGCTCAGGATGCTTTGAGAGTGCTTGATATCATACTGAGGCAACAAGCAGCTAGCAGGGGATGTCTCTTGGTAAGACAATCATTCTTTCATGACGACTCAAGGAATTTCACTGATGTTGGAGGTGGAGTAATAGGACTTCGGGGTTTTCATTCGAGCTTCCGTCCCACACAGGGTGGATTGTCTCTCAATATGGATGTCTCAACAACGATGATCTTAAAACCTGGACCTGTAATTGATTTTCTGCTATCCAACCAAAATGTGAGGGAACCACGTTATATTGACTGGGCAAAGGCCAAGAAAATGCTTAAAAATTTAAGGGTGCATGCAACACACCGTAACCAGGAATTTAAAATTATTGGCTTGAGCGAGAAACCCTGCAATCAGCAACTTTTTAGCATGAAAGTGAAAAATGTTGACAGCAGTAGTGGAGGGCAGACAGTGGATATTACTGTTTATGAGTATTTTGCTAAACACTGTGGCATAGAACTGACCTCTGCATATCTTCCTTGTGTTGATGTGGGGAAGCCAAAACGGCCCAACTATCTGCCCTTGGAGCTCTGTTCACTTGTTTCCCTTCAGCGTTATACAAAGGCATTATCTCCAGTGCAGAGAGCTTCTTTAGTTGAAAAATCACGGCAAAAGCCTCAAGATAGAATCAAAACTCTGACAAATGCTGTGGCAAATTATTGCTATGATGACGACCCTGTTCTTGCTGCATGTGGCATTTCTATTGGGAAGCAATTGACACAAGTTGAAGGTCGAGTTCTTGAGACTCCGAAGTTGAAGGTTGGTAAGAATGATGACTGCTTCCCCTGTAATGGAAGGTGGAACTTTAATAACAAGACACTTCTACAACCAGCTCAGATTGATCGCTGGGTTGTTGTCAACTTTTCTGCTCGTTGTGATACTAGTTACATTTCAAGGGAGCTTATTAAATGCGGAATGAATAAGGGAATTCACATTGAACGCCCATATACTTTAATTGAGGAAGATCCTCAATTAAGAAGATCTAGCCCTGTTGCAAGGGTTGAAAAGATGTTTGAGTTGCTTACAGCAAAGCTTCCAAGTGAACCAGAGTTAATTCTCTGTGTCTTGCCAGAGAGGAAAAATTGTGACATTTATGGACCCTGGAAGAAGAAATGTCTGAGTGAATTTGGTGTTGTCACACAATGCATTTCTCCTTTCAAGATCAATGATCAATACCTTACTAACGTACTTCTTAAAATCAATACTAAGCTTGGAGGAATAAATTCTTTGTTGGCCATAGAGCATTCTGGGCATCTTCCCCTTGTAAAAGACACTCCGACGATGATTCTAGGGATGGATGTCTCTCATGGTTCCCCTGGTCGATCAGACATCCCATCAGTAGCAGCGGTTGTAGGATCTCGACGTTGGCCACTAATTTCAAGGTATAGAGCATCTGTGCGAACACAGCCATCTAAGGTGGAAATGATTGATGCCCTATACAAGCCTTTGGCAGATGGGAAAGATGATGGTATAATCAGAGAACTGCTTCTGGATTTCTATGATTCGAGCAAGGGACGCAAACCAACTCAAATTATTGTCTTCAGGGACGGAGTTAGTGAATCACAATTTAATCAGGTTTTGAACATTGAACTGGACCAGATAATCAAGGCTTATCAACATCTTGGAGAGGTTGATGCTCCCAAGTTTACAGTAATTGTGGCACAAAAGAATCACCATACAAAGCTGTTTCAAGCTAATGGTCCAGAAAATGTCCCTCCTGGGACAGTTGTTGACACAAAAATCGTTCATCCAAGGAACTATGATTTCTACATGTGTGCCCAAGCAGGGATGATTGGAACTTCTAGGCCAGCACATTATCATGTGTTGTTTGATGAGATTGGTTTCTCGGCAGATGGCTTACAAAATTTAATCCATTCACTGTCTTATGTGTATCAAAGGAGTACAACTGCCATTTCAATTGTGGCACCCATATGCTACGCCCACCTTGCTGCTGCTCAAATGGGGCAATTTTTGAAGTTTGATGATTCATCAGAAACATCAAGTTTCACATCGGCAGGAAATGTCCCCATCCCAGAGCTTCCAAGGTTGCATCAGAATGTTCAGAGTACCATGTTCTTCTGCTGA 2703 0.4203 MEKVTGIMETIETPSLHPPSPDAPHKTEPEQVAPAKYSIVSRCEVGTAGKRMPLLANHYKVSVNVPDAIFFQYSVCITSEYDRAVESKGIGRKLIDRLYQTYSSELGGKRFAYDGERTLYTVGPLPHKKFEFMVVLEESFTKRSSGSSGADASLSEETKRSKHSFQSKNFKVEISFAAKIPLQSIALALKGVESDSNAQDALRVLDIILRQQAASRGCLLVRQSFFHDDSRNFTDVGGGVIGLRGFHSSFRPTQGGLSLNMDVSTTMILKPGPVIDFLLSNQNVREPRYIDWAKAKKMLKNLRVHATHRNQEFKIIGLSEKPCNQQLFSMKVKNVDSSSGGQTVDITVYEYFAKHCGIELTSAYLPCVDVGKPKRPNYLPLELCSLVSLQRYTKALSPVQRASLVEKSRQKPQDRIKTLTNAVANYCYDDDPVLAACGISIGKQLTQVEGRVLETPKLKVGKNDDCFPCNGRWNFNNKTLLQPAQIDRWVVVNFSARCDTSYISRELIKCGMNKGIHIERPYTLIEEDPQLRRSSPVARVEKMFELLTAKLPSEPELILCVLPERKNCDIYGPWKKKCLSEFGVVTQCISPFKINDQYLTNVLLKINTKLGGINSLLAIEHSGHLPLVKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSRRWPLISRYRASVRTQPSKVEMIDALYKPLADGKDDGIIRELLLDFYDSSKGRKPTQIIVFRDGVSESQFNQVLNIELDQIIKAYQHLGEVDAPKFTVIVAQKNHHTKLFQANGPENVPPGTVVDTKIVHPRNYDFYMCAQAGMIGTSRPAHYHVLFDEIGFSADGLQNLIHSLSYVYQRSTTAISIVAPICYAHLAAAQMGQFLKFDDSSETSSFTSAGNVPIPELPRLHQNVQSTMFFC 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2661 900 FunFam Protein argonaute 7 266 392 - -
Glsi08g2661 900 CDD Piwi_ago-like 432 859 IPR045246 -
Glsi08g2661 900 SMART Piwi_a_2 557 865 IPR003165 GO:0003676
Glsi08g2661 900 Pfam Piwi domain 557 865 IPR003165 GO:0003676
Glsi08g2661 900 Gene3D paz domain 265 392 - -
Glsi08g2661 900 Gene3D - 452 618 - -
Glsi08g2661 900 ProSiteProfiles Piwi domain profile. 557 865 IPR003165 GO:0003676
Glsi08g2661 900 Pfam PAZ domain 275 404 IPR003100 GO:0005515
Glsi08g2661 900 SUPERFAMILY PAZ domain 266 428 IPR036085 GO:0005515
Glsi08g2661 900 ProSiteProfiles PAZ domain profile. 296 388 IPR003100 GO:0005515
Glsi08g2661 900 Pfam N-terminal domain of argonaute 50 209 IPR032474 -
Glsi08g2661 900 CDD PAZ_argonaute_like 271 387 - -
Glsi08g2661 900 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 32 867 - -
Glsi08g2661 900 FunFam Protein argonaute 3 625 900 - -
Glsi08g2661 900 Pfam Argonaute linker 1 domain 221 268 IPR014811 -
Glsi08g2661 900 MobiDBLite consensus disorder prediction 1 31 - -
Glsi08g2661 900 Pfam Argonaute linker 2 domain 415 459 IPR032472 -
Glsi08g2661 900 Coils Coil 900 900 - -
Glsi08g2661 900 SMART PAZ_2_a_3 272 410 IPR003100 GO:0005515
Glsi08g2661 900 SUPERFAMILY Ribonuclease H-like 542 863 IPR012337 -
Glsi08g2661 900 Gene3D - 624 900 IPR036397 GO:0003676
Glsi08g2661 900 SMART DUF1785_2 219 271 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2661 Glsi-ChrGlsi08 29443353 29450471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2661 46 900 Eukaryotic Initiation Factors Gene Family AT1G48410 37.680 7.55e-174 530