Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2644 ATGCTTAGGCTTCCATGCTTTTGTTGTGCACCAGGTTGCAAGCACAACATTGACCACCCAAGAGCAAGGCCTCTCAAGGATTTTAGAACCCTTCAAACACATTATAAGAGGAAGCATGGGATCAAACCCTACATGTGCAGAAAATGTGGCAAAGCATTTGCAGTGAAAGGTGATTGGAGAACTCATGAGAACTCATGGAACAACTTGTATAGCATCTTAAAAGAAAATTCAATTGATTCTACAATTTCTATCAGATCGGTCTATGAGGGCCGAGAGTCCAACAGTTTGTTGCCCAGGAAAAACTTAACTGGGAGTATTCCTTCAGACATTACCAAATTGACTGGCCTAGTTGAACTATGGCTTGATGGAAATATGTTGACTGGTTTAATATCAGATTTTACTGGATGCATGGACTTGAAGATTATTCATCTTGAGAACAGTCTGTTGATGGGTGAGATCCCTTCCTCTTTGGTGAACCTCCCAAATTTGAGGGATTTGTATTTGCAAAATAATGTTATCTGGAATAGTGCCATCAGGTCTTCTGAGCAAAGATTTGGTTTTGAGCTATTCTGGAAACATCAATCTTCACAAAGGAAGCAGAAAAAAGAGCCACATGTTTGTTATTGTTGCTTCATCAGTTGGGGCTGCTGTTCTACTTTTAGCTACTATTGCATCTTGCCTATTTATGCTCAAAGGAACGAGAGGATATTATGGAGAAGGCAGGAGTCTTAA 732 0.4003 MLRLPCFCCAPGCKHNIDHPRARPLKDFRTLQTHYKRKHGIKPYMCRKCGKAFAVKGDWRTHENSWNNLYSILKENSIDSTISIRSVYEGRESNSLLPRKNLTGSIPSDITKLTGLVELWLDGNMLTGLISDFTGCMDLKIIHLENSLLMGEIPSSLVNLPNLRDLYLQNNVIWNSAIRSSEQRFGFELFWKHQSSQRKQKKEPHVCYCCFISWGCCSTFSYYCILPIYAQRNERILWRRQES 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2644 243 Gene3D Ribonuclease Inhibitor 62 210 IPR032675 -
Glsi08g2644 243 Gene3D Classic Zinc Finger 29 61 - -
Glsi08g2644 243 SUPERFAMILY beta-beta-alpha zinc fingers 30 65 IPR036236 -
Glsi08g2644 243 ProSiteProfiles Zinc finger C2H2 type domain profile. 44 75 IPR013087 -
Glsi08g2644 243 PANTHER ZINC FINGER PROTEIN WIP2 1 65 IPR043584 GO:0003700|GO:0010468
Glsi08g2644 243 SUPERFAMILY L domain-like 97 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2644 Glsi-ChrGlsi08 28590764 28598330 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2644 1 70 C2H2 Transcription Factor Family AT3G57670 82.857 1.67e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Glsi08g2644 None None None