Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2614 ATGCACTTCTTGTATCATGAGGAGTATCGTTCACAAACCAAATTAGTAAAGCTAACTACAGGATCAATTCTAGGCTCACTTCTTGTTGTGTTAGTAACTACTGCAGTTCATTGCATCTACAAATCTCATAGATTAAAGAAACAAAATCAAGCAATCATTGAAAAGTTCTTGAAAGATTATAGAGCTCTCAAACCTACAAGATATTCTTATGCTGAAATTAAGAGAATTACAAATCAGTTTAAGGAAAAGTTAGGAGAGGGAGCTTATGGTACTGTTTTCAAAGGCCAAATTTCAAGCCAATTCACAGTCGCTGTGAAAATTCTCACTCATTCCCAAGGAAATGGGGAAGACTTCATTAATGAAGTTGGAACAATGGGTAGAATCCATCATGTTAATATTGTTCGCCTAATTGGCTTCTGTGCTGATGGCTTTAGAAGGGCTCTTGTTTATGACTTGTTACCAAATGGTTCACTCCAGAAGTTCACAAATTCATCAGAGAACAGGAAAAACTTTCTTGGTTGGGAAAAGCTGCACGAAATTGCTTTAGGTATTGCTAAAGGAGTTGAGTATCTACATCATGGGTATGTTTATAGCTTTGGGATGCTGCTGCTTGAAACAATAGGGGGGAGGGAGATCACAGAGGACACAGTGGAGAACACTAGCCATGTTCACTACCCAGAATGGATATATAATATTTTAGAAGAAAGGGAAGAAGTAACAATTCATTTTGAAGAAAGGGATGCTAAAATTGCAAAAATACTAGCAATAGTGGGACTGAGGTGCATCCAATGGCATGCTGTGGATAGACCATCAATGCAAACTGTGGTTCAAATGTTGGAAGGAGAAGGAGACCAATTAGGAGTACCTCCTAATCCATTTGCTTCTGAACGTTCATCAACCAAAAGAGCAAGTATGCCCGGGAGACACTTGATCCAAGGTTTAGAAATTATACATGAATTAGAGTGA 966 0.382 MHFLYHEEYRSQTKLVKLTTGSILGSLLVVLVTTAVHCIYKSHRLKKQNQAIIEKFLKDYRALKPTRYSYAEIKRITNQFKEKLGEGAYGTVFKGQISSQFTVAVKILTHSQGNGEDFINEVGTMGRIHHVNIVRLIGFCADGFRRALVYDLLPNGSLQKFTNSSENRKNFLGWEKLHEIALGIAKGVEYLHHGYVYSFGMLLLETIGGREITEDTVENTSHVHYPEWIYNILEEREEVTIHFEERDAKIAKILAIVGLRCIQWHAVDRPSMQTVVQMLEGEGDQLGVPPNPFASERSSTKRASMPGRHLIQGLEIIHELE 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2614 321 Gene3D Transferase(Phosphotransferase) domain 1 196 286 - -
Glsi08g2614 321 Pfam Protein tyrosine and serine/threonine kinase 79 193 IPR001245 GO:0004672|GO:0006468
Glsi08g2614 321 SUPERFAMILY Protein kinase-like (PK-like) 62 280 IPR011009 -
Glsi08g2614 321 PANTHER RUST RESISTANCE KINASE LR10-RELATED 196 298 IPR045874 GO:0004672
Glsi08g2614 321 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
Glsi08g2614 321 Gene3D Transferase(Phosphotransferase) domain 1 153 195 - -
Glsi08g2614 321 Gene3D Phosphorylase Kinase; domain 1 51 152 - -
Glsi08g2614 321 ProSiteProfiles Protein kinase domain profile. 78 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2614 321 FunFam serine/threonine-protein kinase PBS1-like 46 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2614 Glsi-ChrGlsi08 26852237 26859347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2614 192 292 Receptor kinase-like Gene Family AT1G66910 45.283 1.10e-17 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Glsi08g2614 PK_Tyr_Ser-Thr 1.4e-21 CL0016