Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2459 ATGATGATGTTTGATGAGATGGGGTTTTGTGGTGATTTGGATTTGTTATCTGCACCCCTCGGGGAAGGGGATGTTGTCACCCGGCAAACTGAGCAAGAGGTGGCAGTTGAGGATGATTATAGTGATGAAGAAATTGATGTGGACGAGCTTGAGAGGAGGATGTGGAGGGACAAGCTGCGTCTCAAGCGATTAAAAGAACAGAGCAAATCTAAGGAAGGAATAGATGCAGCAAAGCAAAGGCAGTCTCAAGAACAGGCAAGGAGGAAGAAGATGTCCAGGGCACAAGATGGAATCTTAAAGTACATGCTGAAAATGATGGAGGTTTGCAAGGCCCAGGGCTTTGTTTATGGGATAATTCCTGAGAAGGGAAAACCAGTGACTGGGGCATCTGACAATCTTCGCGAGTGGTGGAAGGATAAAGTTAGGTTCGATCGAAATGGTCCAGCTGCCATAGCCAAGTATCAAGCAGATCATGCGATCCCAGGCAAGAATGATGGTGGCAATTCTCTTGGTCCAACTCCACATACCCTACAAGAGCTTCAAGACACAACCTTGGGTTCTCTCTTGTCTGCACTCATGCAGCACTGTGATCCACCTCAGAGACGATTTCCATTAGAAAAGGGTGTTGCTCCACCATGGTGGCCCACAGGGAATGAAGAATGGTGGCCTGAAATTGGTTTGCCTAAAGATCAAGGTCCTCCACCATACAAGAAACCTCACGACCTCAAGAAGGCCTGGAAGGTTGGTGTTTTAACTGCGGTTATAAAGCACATGTCTCCTGATATTGCCAAGATTCGCAAGCTAGTAAGGCAGTCCAAATGCCTTCAAGACAAAATGACAGCCAAGGAAAGTGCAACCTGGCTTGCCATCATCAATCAGGAGGAAGCTTTTGCACGGGAGCTTTACCCTGACTATTGTCCCCCATTGTCCTCAGCTGGAGGCAGTGGCTCTTTGGTCATCAATGATTGCAGTGAGTATGATGTTGAAGGGGCTGAGGATGAGGCAAACTTTGATGTGGAGGAACGGAAACCTGAGAATCATAACCCATCCAATCTCGGGATGGAGAGAATGAGGGGAAGGCTGCAGTTTCAGCAACCTTCTTTTCCAATCAAGGGAGAGGTTGTTACAAACTTGGATTTCATCCGGAAGAGGAAAATTTCCAGTGACCTTAACATGATGATGGAGCAGAAAATCTACACATGTGAACACCCCCAGTGTCCTTACAGTGAAGTTCGCCTTGGTTTTCATGACAGGACTTCTAGGGACAATCATCAACTGAATTGTCCATATAGAGGCAGTTCTTCAGATTATGGGGGCCCAAATTTTCATGTTAATGAGGTGAAACCAGTTATATTTCCTCAATCATTTGTTCAACCTAAACCTACTGCTCAATCTGTTAATTTAGTTCCACCTTCATTTGATCTATCCGGGCTTGGAGTTCCAGAAGATGGGCAGAAAATGATTAGCGACCTCATGTCAGTCTACGATACAAATGTTCAAGGTAACAAGAACGTAAGTTCCAGTAACCGTGTAGCTGCAGAAAATCAAAACCTTCCCCAACAACAGAACAATTTCTTTCCTAATCAAGGAGTCGTGATGGAGGGAAACTTCTTCGAACACCCCAACATGTCCAATAATCATCACCCCATGTTTGCCCGAGAGGAAGGTCAGTTTGACCGGTTCAAGTCTTTGAACGTTCCATTTGAGACCAGCCACAACAACAACAGCAATAATTTCCCTTTGATGTTTGGGTCCCCATGTGATCTGGCGTCCTTCGATTTCAAGGAGGATCTACAAGGAGTAGGAATGGACACGCTTCAGAAACAGCCAGATATCTCAATATGGTATCATTGA 1854 0.4552 MMMFDEMGFCGDLDLLSAPLGEGDVVTRQTEQEVAVEDDYSDEEIDVDELERRMWRDKLRLKRLKEQSKSKEGIDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADHAIPGKNDGGNSLGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPTGNEEWWPEIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEAFARELYPDYCPPLSSAGGSGSLVINDCSEYDVEGAEDEANFDVEERKPENHNPSNLGMERMRGRLQFQQPSFPIKGEVVTNLDFIRKRKISSDLNMMMEQKIYTCEHPQCPYSEVRLGFHDRTSRDNHQLNCPYRGSSSDYGGPNFHVNEVKPVIFPQSFVQPKPTAQSVNLVPPSFDLSGLGVPEDGQKMISDLMSVYDTNVQGNKNVSSSNRVAAENQNLPQQQNNFFPNQGVVMEGNFFEHPNMSNNHHPMFAREEGQFDRFKSLNVPFETSHNNNSNNFPLMFGSPCDLASFDFKEDLQGVGMDTLQKQPDISIWYH 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2459 617 FunFam Ethylene insensitive 3-like 1 168 305 - -
Glsi08g2459 617 Gene3D - 80 160 IPR023278 GO:0003700|GO:0005634
Glsi08g2459 617 FunFam Ethylene insensitive 3-like 1 80 158 - -
Glsi08g2459 617 Pfam Ethylene insensitive 3 48 295 IPR047091 GO:0003700
Glsi08g2459 617 SUPERFAMILY DNA-binding domain of EIN3-like 174 298 IPR023278 GO:0003700|GO:0005634
Glsi08g2459 617 Gene3D - 172 305 IPR023278 GO:0003700|GO:0005634
Glsi08g2459 617 MobiDBLite consensus disorder prediction 70 91 - -
Glsi08g2459 617 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 31 577 IPR006957 GO:0003700|GO:0005634
Glsi08g2459 617 Coils Coil 33 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2459 Glsi-ChrGlsi08 22475319 22477172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2459 2 616 EIL Transcription Factor Family AT3G20770 62.175 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Glsi08g2459 EIN3 4.7e-130 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g2459 08 22475319 22477172 Glsi08g2459 08 22475319 22477172 ECH