Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2449 ATGAAGATACAAACTATCTTATTCCTATGCTTATTGATGGCCACGGAAATGGGGTTTTTCTGCAGAGAGAGCAGAGACCCAGTGCTGCACAGGGTTGGAGGAGGAAGGTACACATGGGCACCAAGAGTTAACTTCACAGAGTGGGTTAGCCATGATCACTTCTACAAGGGTGATTGGCTGTACTTTGGGTTTGACAAACACCTCTACAATGTTCTGGAGGTGAACAAGACAAGCTTTGAGAACTGCATAGATGAAGACTTCATGAAGAACATCACGAGAGGAGGGAGAGATGTGTTTCAGCTCTTGGAGGCAAAGCCATATTACTTCATCAGTGGCAATGGCTTCTGCTTTGAGGGCATGAAAGTTGCAGTAAATGTTGAAGAGCCTCCACCAGAAGTTCCAGAACCAGCAGGGTTTGTTCTGACCAATAAGGCTCTCCCATCAAGCACGCAGAGCCACGCTATATTCCTTGTGTTACTTGCCATGGCCACAGCTTTGGCCTTGACCTTTATTTAA 516 0.4612 MKIQTILFLCLLMATEMGFFCRESRDPVLHRVGGGRYTWAPRVNFTEWVSHDHFYKGDWLYFGFDKHLYNVLEVNKTSFENCIDEDFMKNITRGGRDVFQLLEAKPYYFISGNGFCFEGMKVAVNVEEPPPEVPEPAGFVLTNKALPSSTQSHAIFLVLLAMATALALTFI 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2449 171 FunFam Lamin-like protein 27 129 - -
Glsi08g2449 171 SUPERFAMILY Cupredoxins 30 126 IPR008972 -
Glsi08g2449 171 Gene3D - 28 129 IPR008972 -
Glsi08g2449 171 ProSiteProfiles Phytocyanin domain profile. 28 128 IPR003245 GO:0009055
Glsi08g2449 171 Pfam Plastocyanin-like domain 40 120 IPR003245 GO:0009055
Glsi08g2449 171 PANTHER BLUE COPPER PROTEIN 30 144 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2449 Glsi-ChrGlsi08 22306228 22306864 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2449 10 157 Phytocyanin Superfamily AT2G27035 51.333 5.84e-53 164