Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2444 ATGAAGGTTTCGAGCTTGAGAAAAATGGTGGGGATGACGATGGTAATGATGATAACAAGAACTTTGATGGTAAAATCTGAACTGCACTACGTTGGAGGAGGAAAATCTAGCTGGGCTCCCAATGTTAACTTCTCAGAATGGTCAAGTCACGAGCGATTTTATGTTGGGGACTGGCTATACTTCGGATTTGACAAGAAGATTTACAATGTGCTGGAGGTGAACAAGAGCAGCTACGAAAACTGCACAGACTCAGGGTTCATCAAGAACATAACAAAGGGTGGAAGAGACGTGTTTGAGTTAACAGAGGCAAAGCCCTATTACTTCTTAAGTGGAAGAGGTTACTGCTGGCAGGGAATGAAGGTAGCCATCAATGTCTCGGATCCTCAACCCACTCCACCACCACTTCCTCCAACAAAAAGTGCTTCTCCTTCCTCTTTTTATGGCATTCAGATTTACCCACAATTCTTGGTGATCGTCTCAACCTTGATTTGGAAAATCATTAACAACTAG 510 0.4314 MKVSSLRKMVGMTMVMMITRTLMVKSELHYVGGGKSSWAPNVNFSEWSSHERFYVGDWLYFGFDKKIYNVLEVNKSSYENCTDSGFIKNITKGGRDVFELTEAKPYYFLSGRGYCWQGMKVAINVSDPQPTPPPLPPTKSASPSSFYGIQIYPQFLVIVSTLIWKIINN 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2444 169 Gene3D - 27 133 IPR008972 -
Glsi08g2444 169 Pfam Plastocyanin-like domain 38 119 IPR003245 GO:0009055
Glsi08g2444 169 PANTHER BLUE COPPER PROTEIN 28 133 IPR039391 GO:0009055
Glsi08g2444 169 ProSiteProfiles Phytocyanin domain profile. 27 127 IPR003245 GO:0009055
Glsi08g2444 169 FunFam Lamin-like protein 25 128 - -
Glsi08g2444 169 SUPERFAMILY Cupredoxins 28 125 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2444 Glsi-ChrGlsi08 22255064 22257341 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2444 15 145 Phytocyanin Superfamily AT2G27035 56.489 7.28e-54 166