Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2434 ATGCTTGGCCAGTCAATGGGAGAGTGCTCGTGTTTTGCGATCGTGCTTGCAATGGCTGGGTTGAATGACGACGGCTTAACTCAACCGGTTGACATCTTCGCACAGACCCGCCAATACTCCGATTCCGACAAGCCTGTTGATGCTGTGTTAACATTTTCGGGCAAGCTGACATGGATCGATCCTATGGTGTCTGGACAGTTTGGTGAGCATCCATATGTGTATGATGTATTAGTGTTCGAAGCCATGGCCACGTTTATTGGCCAAGTCTCTATCCTCTCCCTCATTTCCATCTTTGGTGCTGCCACTACAGCCATGCTAGTTTCTTTGGCACAATCTGGGCACACGATAACACATGATTTACTGACAAGCGGTGTTGATTTGGAAAATCTGAAACCTCCCCAAATGGAAGGTTTGGATGTATTACTAGCAAGATTAATTCCAATTTTCAAACTATTGGCAATGGCAGACTTTATCTGCATTGTTAACTTGCTTTATGAAGTTCTGGTTGTATTTTGTATCATCATGATCTTGAACATGCCTCTTTCTGCTGTGACATCAATAACTGACGGCTTGAAGAGACTGTACATTGAAAAGTTGAAGCCATTAGAAGTTACTGACCGCTTTAATGATTTTGTGTCTCCATTACTGGGAAATAGTGATTTTGATGCCAAACCGATGGGACGGTTTGAAATTCTGTCATTATCTGGCTCATTCATGCCAAATGAAAGTGAAGGAGCACGGAGCAGATCTGGTGGCATGAGTGTTTCATTAGCAAGTCCAAATGGACGTGTTGTAGGGGGTGGAGTGGCTGGTCTATTGGTAGCTGCAAGTCCTGTGCAGGTAGTGGTAGGTAGTTTTCTGGCAGGAAACCAACATGAGCAAAAGCCAAAAAAATAG 897 0.4404 MLGQSMGECSCFAIVLAMAGLNDDGLTQPVDIFAQTRQYSDSDKPVDAVLTFSGKLTWIDPMVSGQFGEHPYVYDVLVFEAMATFIGQVSILSLISIFGAATTAMLVSLAQSGHTITHDLLTSGVDLENLKPPQMEGLDVLLARLIPIFKLLAMADFICIVNLLYEVLVVFCIIMILNMPLSAVTSITDGLKRLYIEKLKPLEVTDRFNDFVSPLLGNSDFDAKPMGRFEILSLSGSFMPNESEGARSRSGGMSVSLASPNGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKPKK 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2434 298 Gene3D - 178 231 - -
Glsi08g2434 298 Pfam Plants and Prokaryotes Conserved (PCC) domain 216 286 IPR005175 -
Glsi08g2434 298 Pfam N-terminal EH-domain containing protein 190 222 IPR031692 -
Glsi08g2434 298 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 94 295 IPR039605 GO:0003680
Glsi08g2434 298 SUPERFAMILY AF0104/ALDC/Ptd012-like 227 288 - -
Glsi08g2434 298 ProSiteProfiles PPC domain profile profile. 165 298 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2434 Glsi-ChrGlsi08 21820815 21830054 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2434 227 298 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 86.301 1.20e-33 124