Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2383 ATGGCGTCCCTTTCTTTCGACTTTCGCATCTACAGCGATGATCACATTTTAACCCTCGAAGAATTAGAGTACCCAATGAGTGGATCAGATCAGTACTTCCATGTCAAGTTTCTTCTTCTTAGACAAATTCTTAGGCCTCACTCAGAACTACCCACAACGACACCTTCTTTGTTATCGTTGGAAACTTCTTCCATTATACCCTGCAAAGAACAACTCGAAGTTCCCCAGGAAGAAGATTTAGACATGGAGAACTGGGTCATTCAACAGTTCATGCAACAAGTGCCTATGAAGAAAGCCGTAGAGTCACTTAACAAAGTGAGAGTGGTGAATGTCGGGGATGAGCCGGAACGATGCAGTATTTGCCTGAAAGATTTCAAAGATGGTGAGAAGACTTCAGCAATACCGTGTAACCATTTCTATCAGAAGAATTGTATTGCTTAG 441 0.4218 MASLSFDFRIYSDDHILTLEELEYPMSGSDQYFHVKFLLLRQILRPHSELPTTTPSLLSLETSSIIPCKEQLEVPQEEDLDMENWVIQQFMQQVPMKKAVESLNKVRVVNVGDEPERCSICLKDFKDGEKTSAIPCNHFYQKNCIA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2383 146 Pfam RING-like zinc finger 118 145 IPR001841 -
Glsi08g2383 146 SUPERFAMILY RING/U-box 99 145 - -
Glsi08g2383 146 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 146 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2383 Glsi-ChrGlsi08 20622362 20622970 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2383 92 145 C3H Transcription Factor Family AT1G68070 35.185 7.04e-06 42.7