Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2376 ATGGAACAGAGAAGCTCCTCTTATCTTCTTCTTCTTCTCTCTCTTCTTCTGCTTCTCTGTTTCTCAGGATCTGTTCAAGCTTACAAGAATTACACAGTCGGAGACTCTCTGGGTTGGTTTGACAATCTTGAGAAGCCTGCTGTGAATTACCGGAAATGGGTTTCCGGTAAAGAGTTCAGCTTGGGAGATTTCCTCATTTTCAACACCGACAATAACCACTCTGTAGTTCAAACCTACAATTTCACCACATACAAACTATGTGATTATGATGATGCACAAGATAGTGACACAACCCAATGGTCCGCATCCGATCCATCAGCGACTGAGCCCCATCCGGTTTCGGTGGCAGTGCCATTGGTAAAGGAAGGGATGACATACTTCTTCTCAAGTGACTATGATGGTGAGCAGTGTAAGAATGGGCAACATTTCAAGATAAATGTGACTTATGGACAAGGGTTGCCAAAGGGTCTGAAAAACTCCCCTCAAGATTCTCCTTCTCCTGCTAGCCCTATTGCTGGGGATGAAGATTCAGCACCAGATACAATAGTTCCTTCTAATTTCAACAATCCTCACGAAGAAGCAAGTGATGCTGATGAGAAAGCTAGCGACAAAGAGAAATCTAGTTCTGTTTCATTGTCAAAGTATGTCCACCTTCACAACACTTTGTGCAAATCCTTGATAATGTTATGGTTTGTTTTCCTTTTTTAA 708 0.4237 MEQRSSSYLLLLLSLLLLLCFSGSVQAYKNYTVGDSLGWFDNLEKPAVNYRKWVSGKEFSLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDDAQDSDTTQWSASDPSATEPHPVSVAVPLVKEGMTYFFSSDYDGEQCKNGQHFKINVTYGQGLPKGLKNSPQDSPSPASPIAGDEDSAPDTIVPSNFNNPHEEASDADEKASDKEKSSSVSLSKYVHLHNTLCKSLIMLWFVFLF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2376 235 Pfam Plastocyanin-like domain 39 141 IPR003245 GO:0009055
Glsi08g2376 235 MobiDBLite consensus disorder prediction 154 206 - -
Glsi08g2376 235 MobiDBLite consensus disorder prediction 192 206 - -
Glsi08g2376 235 FunFam Early nodulin-like protein 18 28 150 - -
Glsi08g2376 235 SUPERFAMILY Cupredoxins 29 147 IPR008972 -
Glsi08g2376 235 ProSiteProfiles Phytocyanin domain profile. 29 149 IPR003245 GO:0009055
Glsi08g2376 235 Gene3D - 28 152 IPR008972 -
Glsi08g2376 235 PANTHER BLUE COPPER PROTEIN 28 190 IPR039391 GO:0009055
Glsi08g2376 235 CDD Phytocyanin 29 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2376 Glsi-ChrGlsi08 20144171 20147087 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2376 9 200 Phytocyanin Superfamily AT1G08500 61.538 1.55e-81 241