Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2361 ATGCACCGCGAATCGCCTCGCGAGACGTTGAATTTTTACGGGAGAGAAGCCGCTGTGCCGTCATCATCACGGTCCTCCGATAAGCTTCCCTGCATCAGAAACTCCCTCAAACTATCGGAATCGCAGCGCCACAAGGGAAGTGCCATTACAACCATGGATTCGAGATGGTGCTGTGCCATTCTAGTTCTTCTGCTTGCGCCGTTCATGGCTTCTTCAGGTTCAGTTATCAGGAGTTTACCTGGCTACAATGGGGATCTACCCTTCAAGCTTGAATCTGGATACATTGGAGTGGGCGAAGAGGAGGATGTGCAATTATTTTACTTATTTGTGGAGTCTCAAAGAAACCCGTCAAAAGATCCACTCCTGCTTTGGTTTGTTGGAGGCCCTGGTTGCTCAGGGCTCTCCGCATTCCTTTTTGAAAATGGGCCTTTAGTAATTGACCGCAATTACAGTGGGAATCTTCCAAGACTTGAATTAAACCCGTATGCTTGGACGCAGGTACTCAACGTCATATACATAGATATACCAGTGGGCACTGGATTTTCTTACTCACAAACACAAGAAGGTTACCATAGCAGTGATACACTATGGGTGGAGCATACATATAGTTTTCTGCAGAAGTGGTTTATTGATCATCCTAAGTTTGGCTCAAATCCATTTTACATTGGTGGTGGTTCATATTCAACTCTACCTGGCGCTCCCCTTGTTATGAAAGTATATGAAGGTAACCAAGCAGGAAACACTCCATTCATGAATATCAAAGGTTTTGTGTTCGCCAGCCCATTGACTGATAAACATCTGGACTATAACATGAGAGTTGTATATGCACACCAAATGAGTCTTATATCGGATGAGCTCTACGAGTCAATGAAAGCAAGTTGCAATGGTGATTACGTCAACATTAATCCAAAAAACACAAAGTGTGTCTTAGATCATGCAGCTTACTCTGATCTAGTTCGTTACATAAACTTCAATCAAATTTTGGAACCTGTATGTGTTACTACTCCCAAGGAGAATGATAAGATTCTCTTGGAAGATTCATCTGAAGGAATCCTCCTGTCATTACAAAGCACTTCGGCATTCTGGTGTCGTGATTATGATCATATACTCATTAATCTATGGGCAAATGATGAGAATGTCAGGAAGGCTCTTCATGTGAGAGAGGGAACTGAAGTGGAGTTCGAGAGATGCAACAACAGTTTATCATACACAAATAATCTATATAGTGTTGTTGATTATCATCGCAATTTCACTGACACGAACCTTCATTCTCTTATTTATTGTGCTGATCTTGACATGTTGATGCCGCAAATAAGTACAAAAACTTGGATAAAGTCATTGAAATTGGAAATACATGATACTTGGCGTGCATGGTTTTTTGAAGGTCAAGTGGCCGGATACACACAAATCTACAAGAAACACAATTACTACTTGACATATGTGGCTGTGAAAGGAGCTGGTCATGTGGCCCAATCATATAAGCCCAAGGAAGTTTTCCAAATGATAGACAGGTGGTTCTCTTATTCTCCTATTTAA 1536 0.4167 MHRESPRETLNFYGREAAVPSSSRSSDKLPCIRNSLKLSESQRHKGSAITTMDSRWCCAILVLLLAPFMASSGSVIRSLPGYNGDLPFKLESGYIGVGEEEDVQLFYLFVESQRNPSKDPLLLWFVGGPGCSGLSAFLFENGPLVIDRNYSGNLPRLELNPYAWTQVLNVIYIDIPVGTGFSYSQTQEGYHSSDTLWVEHTYSFLQKWFIDHPKFGSNPFYIGGGSYSTLPGAPLVMKVYEGNQAGNTPFMNIKGFVFASPLTDKHLDYNMRVVYAHQMSLISDELYESMKASCNGDYVNINPKNTKCVLDHAAYSDLVRYINFNQILEPVCVTTPKENDKILLEDSSEGILLSLQSTSAFWCRDYDHILINLWANDENVRKALHVREGTEVEFERCNNSLSYTNNLYSVVDYHRNFTDTNLHSLIYCADLDMLMPQISTKTWIKSLKLEIHDTWRAWFFEGQVAGYTQIYKKHNYYLTYVAVKGAGHVAQSYKPKEVFQMIDRWFSYSPI 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2361 511 FunFam Serine carboxypeptidase-like 19 69 338 - -
Glsi08g2361 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 478 491 IPR001563 GO:0004185|GO:0006508
Glsi08g2361 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 172 IPR001563 GO:0004185|GO:0006508
Glsi08g2361 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 208 233 IPR001563 GO:0004185|GO:0006508
Glsi08g2361 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 183 IPR001563 GO:0004185|GO:0006508
Glsi08g2361 511 Gene3D alpha/beta hydrolase 70 343 IPR029058 -
Glsi08g2361 511 SUPERFAMILY alpha/beta-Hydrolases 76 507 IPR029058 -
Glsi08g2361 511 Gene3D - 363 510 - -
Glsi08g2361 511 FunFam Carboxypeptidase 361 511 - -
Glsi08g2361 511 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 76 495 IPR001563 GO:0004185|GO:0006508
Glsi08g2361 511 Pfam Serine carboxypeptidase 80 507 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2361 Glsi-ChrGlsi08 19810438 19833466 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2361 374 511 Calmodulin-binding Proteins AT2G22960 43.478 3.86e-34 125